Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, extracellular
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- extracellular 2
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G303100.1 | Wheat | extracellular, plasma membrane | 100.0 | 98.56 |
| TraesCS1B01G314000.1 | Wheat | extracellular, plasma membrane | 98.54 | 97.6 |
| HORVU1Hr1G069180.1 | Barley | cytosol, extracellular, plasma membrane | 96.6 | 95.67 |
| Zm00001d038514_P001 | Maize | plastid | 79.13 | 72.12 |
| EES19708 | Sorghum | plastid | 77.67 | 71.43 |
| Os05t0484800-01 | Rice | plastid | 78.64 | 69.23 |
| Zm00001d010627_P001 | Maize | cytosol, plastid | 75.73 | 69.03 |
| TraesCS3A01G340800.1 | Wheat | cytosol, extracellular, peroxisome | 65.53 | 65.53 |
| TraesCS3A01G340700.1 | Wheat | cytosol, extracellular, peroxisome | 63.59 | 64.85 |
| GSMUA_Achr11P... | Banana | cytosol | 51.94 | 54.04 |
| GSMUA_Achr7P21880_001 | Banana | cytosol | 51.94 | 52.97 |
| GSMUA_Achr10P... | Banana | plastid | 51.46 | 50.72 |
| GSMUA_Achr4P02410_001 | Banana | cytosol, peroxisome, plastid | 50.97 | 50.48 |
| VIT_08s0032g00760.t01 | Wine grape | cytosol | 48.54 | 50.0 |
| TraesCS3A01G340900.1 | Wheat | mitochondrion | 66.02 | 49.1 |
| VIT_08s0056g00180.t01 | Wine grape | cytosol | 49.03 | 46.76 |
| TraesCS5A01G145200.1 | Wheat | cytosol | 51.94 | 46.52 |
| TraesCS5A01G557700.1 | Wheat | cytosol | 46.12 | 46.12 |
| GSMUA_Achr11P... | Banana | cytosol | 52.43 | 45.96 |
| CDY62436 | Canola | cytosol | 40.78 | 42.86 |
| CDX91482 | Canola | cytosol | 40.29 | 42.56 |
| CDY07715 | Canola | cytosol | 40.29 | 42.35 |
| TraesCS4A01G192000.1 | Wheat | cytosol | 50.0 | 42.21 |
| Bra005092.1-P | Field mustard | cytosol | 39.81 | 42.05 |
| CDY07714 | Canola | cytosol | 39.81 | 42.05 |
| CDY62435 | Canola | cytosol | 39.81 | 42.05 |
| AT2G38640.1 | Thale cress | cytosol | 39.81 | 41.84 |
| KRH09578 | Soybean | cytosol | 42.23 | 41.83 |
| CDY60759 | Canola | cytosol | 39.32 | 41.54 |
| Bra000079.1-P | Field mustard | cytosol | 39.32 | 41.33 |
| Bra000080.1-P | Field mustard | cytosol | 38.84 | 41.03 |
| Bra017111.1-P | Field mustard | cytosol | 38.84 | 40.82 |
| CDY18377 | Canola | cytosol | 38.84 | 40.82 |
| CDX93313 | Canola | cytosol | 38.35 | 40.31 |
| TraesCS3A01G449700.1 | Wheat | plastid | 29.13 | 31.09 |
| TraesCS2A01G113800.1 | Wheat | plastid | 30.1 | 29.67 |
| TraesCS3A01G449500.1 | Wheat | cytosol | 24.27 | 29.59 |
| TraesCS3A01G449600.1 | Wheat | mitochondrion | 17.96 | 29.13 |
| TraesCS3A01G450000.1 | Wheat | cytosol | 27.18 | 28.57 |
| TraesCS3A01G449800.1 | Wheat | cytosol | 26.7 | 27.92 |
| TraesCS3A01G449900.1 | Wheat | plastid | 26.21 | 27.55 |
| TraesCS3A01G296300.1 | Wheat | cytosol | 29.13 | 27.27 |
| TraesCS3A01G450200.1 | Wheat | plastid | 25.73 | 26.77 |
| TraesCS5A01G144800.1 | Wheat | nucleus | 30.58 | 26.36 |
| TraesCS3A01G450100.1 | Wheat | cytosol | 24.27 | 25.51 |
| TraesCS4A01G142700.1 | Wheat | mitochondrion, plastid | 28.64 | 24.28 |
| TraesCS1A01G328100.1 | Wheat | cytosol | 28.64 | 24.28 |
| TraesCS5A01G145000.1 | Wheat | nucleus, plastid | 30.58 | 17.65 |
Protein Annotations
| EnsemblPlants:TraesCS1A01G303600.1 | EnsemblPlantsGene:TraesCS1A01G303600 | Gene3D:3.20.90.20 | InterPro:IPR025659 | InterPro:IPR038595 | InterPro:LOR |
| InterPro:LOR_sf | InterPro:Tubby-like_C | PANTHER:PTHR31087 | PANTHER:PTHR31087:SF21 | PFAM:PF04525 | SEG:seg |
| SUPFAM:SSF54518 | MapMan:35.1 | : | : | : | : |
Description
No Description!
Coordinates
chr1A:-:497192150..497192770
Molecular Weight (calculated)
22379.2 Da
IEP (calculated)
9.655
GRAVY (calculated)
0.017
Length
206 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKVHPNLAV PSLGMAAAAA ARDDEPVTLT VWRKSLLFNC RGFTVFDASG NLVYRVDIYA SDSRAEVVLM DAAGRPVLTV RRKKAISLMG DQWLVFPGEE
101: TRAPPLYAVK RTPQYMRGGG KSTAHVAACA GGARYEVEGS YARRCCAVYD EQRRAVVEVQ PKEAVGTDVF RMVVRPAGMD VSLAMAVVLA LDQMLGRPGL
201: LRSWSS
101: TRAPPLYAVK RTPQYMRGGG KSTAHVAACA GGARYEVEGS YARRCCAVYD EQRRAVVEVQ PKEAVGTDVF RMVVRPAGMD VSLAMAVVLA LDQMLGRPGL
201: LRSWSS
001: MTKVHPKFPS TCEESLCDSK AAVVLTVWKK SLLFNCDGFT VYNANGELVF RVDNYMNCPR DNIVLMDASG FPLLSIRRKK LSLGDCWMVY DGETERDPIF
101: TARKNVSIIS NRKSLAWVSA KKTVLYEIEG SYGQRSCKIL DERRNKKKTA EIKRKETVIG GVAFGKDVYK LIVESEMEPR VAMALTIILD QMFRSS
101: TARKNVSIIS NRKSLAWVSA KKTVLYEIEG SYGQRSCKIL DERRNKKKTA EIKRKETVIG GVAFGKDVYK LIVESEMEPR VAMALTIILD QMFRSS
Arabidopsis Description
Protein LURP-one-related 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVI6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.