Factsheet for TraesCS3A01G449800.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 2
mitochondrion 1
extracellular 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, extracellular
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	extracellular
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G449900.1	Wheat	plastid	91.37	91.84
TraesCS3A01G450000.1	Wheat	cytosol	88.32	88.78
TraesCS3B01G486900.1	Wheat	cytosol, plastid	85.79	86.22
TraesCS3A01G449500.1	Wheat	cytosol	73.1	85.21
TraesCS3D01G442800.1	Wheat	cytosol, plastid	86.29	84.58
TraesCS3D01G442600.1	Wheat	cytosol	85.79	84.5
TraesCS3B01G486600.1	Wheat	cytosol	82.74	82.74
TraesCS3A01G450100.1	Wheat	cytosol	80.2	80.61
TraesCS3A01G449600.1	Wheat	mitochondrion	51.27	79.53
TraesCS3A01G450200.1	Wheat	plastid	79.7	79.29
TraesCS3A01G449700.1	Wheat	plastid	77.67	79.27
HORVU3Hr1G097460.1	Barley	mitochondrion, plastid	82.74	76.89
HORVU3Hr1G097400.6	Barley	cytosol, mitochondrion, plastid	83.76	76.39
EES04157	Sorghum	plastid	65.99	64.68
Zm00001d011926_P001	Maize	cytosol	60.91	59.41
Zm00001d011925_P001	Maize	cytosol	60.91	58.82
Zm00001d042239_P001	Maize	plastid	64.97	58.45
EES04156	Sorghum	plastid	63.45	58.14
Os01t0931600-00	Rice	cytosol	60.41	55.09
EES04155	Sorghum	cytosol	59.9	54.13
TraesCS2A01G113800.1	Wheat	plastid	41.62	39.23
TraesCS4A01G142700.1	Wheat	mitochondrion, plastid	38.58	31.28
TraesCS3A01G340800.1	Wheat	cytosol, extracellular, peroxisome	30.46	29.13
TraesCS3A01G340700.1	Wheat	cytosol, extracellular, peroxisome	28.43	27.72
TraesCS5A01G145200.1	Wheat	cytosol	31.98	27.39
TraesCS1A01G303600.1	Wheat	extracellular, plasma membrane	27.92	26.7
TraesCS5A01G557700.1	Wheat	cytosol	25.38	24.27
TraesCS3A01G296300.1	Wheat	cytosol	26.9	24.09
TraesCS5A01G144800.1	Wheat	nucleus	28.93	23.85
TraesCS4A01G192000.1	Wheat	cytosol	29.44	23.77
TraesCS1A01G328100.1	Wheat	cytosol	26.9	21.81
TraesCS3A01G340900.1	Wheat	mitochondrion	30.46	21.66
TraesCS5A01G145000.1	Wheat	nucleus, plastid	30.46	16.81

Protein Annotations

EnsemblPlants:TraesCS3A01G449800.1	EnsemblPlantsGene:TraesCS3A01G449800	Gene3D:3.20.90.20	InterPro:IPR025659	InterPro:IPR038595	InterPro:LOR
InterPro:LOR_sf	InterPro:Tubby-like_C	PANTHER:PTHR31087	PANTHER:PTHR31087:SF12	PFAM:PF04525	SEG:seg
SUPFAM:SSF54518	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr3A:-:688964500..688965093

Molecular Weight (calculated)

21221.5 Da

IEP (calculated)

8.684

GRAVY (calculated)

-0.138

Length

197 amino acids

Sequence
(BLAST)

001: MAKIQPLPAA ASSSPCSGDQ EGRQAYTVWM KSLIFNGNGC AVYGPDGAVA FRVDNYGCRG GREVFFMDRE GNSLIRIRRK GFGMFRRWEV CRCAHNGGKE
101: EEATPWFSVR RAEKGGAAVA MHGGAGTCYT IDGCSGSKWE YRVRGVDGAV VAEVARKQTP AGVVLGDDVL TLTVAPEVEH LLALGLVVVR GLMNRSM

Best Arabidopsis Sequence Match ( AT1G63410.1 )
(BLAST)

001: MARVFPQAAI SSPYMSTERE TFTVWMKSLV YQTNGLTVYN SNGEITYRVE NYDKCSNEVH IMDLHGNILF TIRKKKLWLF GSWYVYRECG SFTSTEEVKP
101: CARIKRSSIR DGDWEVRDET NEVFWILRFD PKFAFQIIDI HGNIIAQVKP KQSSNGITLG EDVLTLEVKP RVDHSLVVTL VTVYGLIKGV V

Arabidopsis Description

Protein LURP-one-related 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SH27]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.