Factsheet for TraesCS4A01G142700.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

mitochondrion 4
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, plastid
Any Predictor:	mitochondrion, plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G168500.1	Wheat	mitochondrion	97.12	91.47
TraesCS4B01G155500.1	Wheat	cytosol, mitochondrion	93.42	90.8
HORVU6Hr1G081400.1	Barley	mitochondrion	93.42	89.72
Zm00001d029119_P001	Maize	mitochondrion	52.67	51.82
TraesCS2A01G113800.1	Wheat	plastid	44.44	51.67
KXG39402	Sorghum	mitochondrion	51.85	48.84
VIT_02s0025g03730.t01	Wine grape	cytosol	36.21	43.56
VIT_02s0025g03750.t01	Wine grape	cytosol	37.45	43.33
KRH47711	Soybean	peroxisome	34.98	43.15
VIT_02s0025g03740.t01	Wine grape	plastid	36.21	42.72
KRH06275	Soybean	peroxisome	34.57	41.79
PGSC0003DMT400032165	Potato	cytosol	28.81	40.46
Bra021544.1-P	Field mustard	cytosol	34.57	40.38
PGSC0003DMT400007876	Potato	plastid	33.33	40.3
Bra001544.1-P	Field mustard	cytosol	34.16	39.9
TraesCS3A01G449900.1	Wheat	plastid	32.1	39.8
TraesCS3A01G449500.1	Wheat	cytosol	27.57	39.65
Solyc08g080770.2.1	Tomato	plastid	34.57	39.62
Solyc08g080760.1.1	Tomato	mitochondrion	32.1	39.2
Solyc08g080750.2.1	Tomato	plastid	32.51	39.11
KRH77515	Soybean	cytosol	30.86	38.66
TraesCS3A01G449600.1	Wheat	mitochondrion	20.16	38.58
TraesCS3A01G449800.1	Wheat	cytosol	31.28	38.58
PGSC0003DMT400014913	Potato	plastid	32.92	38.46
KRH27952	Soybean	cytosol	30.45	38.34
TraesCS3A01G450100.1	Wheat	cytosol	30.86	38.27
KRH59852	Soybean	cytosol	30.86	38.27
PGSC0003DMT400032166	Potato	plastid	33.33	38.21
TraesCS3A01G449700.1	Wheat	plastid	30.04	37.82
Solyc08g007980.2.1	Tomato	plastid	32.1	37.5
CDY33238	Canola	cytosol, peroxisome, plastid	35.39	37.39
TraesCS3A01G450000.1	Wheat	cytosol	30.04	37.24
CDY67855	Canola	peroxisome	34.57	36.52
AT3G14260.1	Thale cress	cytosol	34.57	36.52
CDX82489	Canola	cytosol	34.16	36.09
Solyc12g056310.1.1	Tomato	plastid	29.22	36.04
TraesCS3A01G450200.1	Wheat	plastid	29.22	35.86
Bra039698.1-P	Field mustard	cytosol	29.22	35.32
CDY24068	Canola	peroxisome	29.22	35.32
CDY24067	Canola	cytosol	29.22	35.32
CDX75761	Canola	cytosol	33.33	35.22
Bra039697.1-P	Field mustard	cytosol, extracellular, peroxisome	28.4	34.33
Bra039696.1-P	Field mustard	cytosol	28.4	34.33
AT1G53870.3	Thale cress	cytosol, nucleus, peroxisome	30.45	34.1
CDY49893	Canola	cytosol	26.75	34.03
Bra027804.1-P	Field mustard	cytosol	26.75	34.03
PGSC0003DMT400010898	Potato	cytosol	17.7	33.86
CDY71164	Canola	cytosol, extracellular, peroxisome	26.75	33.85
KRH41152	Soybean	cytosol	20.58	33.56
PGSC0003DMT400012847	Potato	cytosol	18.11	33.33
CDY24069	Canola	cytosol	23.05	32.0
AT1G53875.1	Thale cress	cytosol, mitochondrion, nucleus, peroxisome	29.22	31.14
AT1G63410.2	Thale cress	cytosol	27.16	30.7
CDY45367	Canola	cytosol	19.34	30.52
CDY36610	Canola	cytosol	18.11	29.73
TraesCS3A01G340800.1	Wheat	cytosol, extracellular, peroxisome	24.28	28.64
TraesCS1A01G303600.1	Wheat	extracellular, plasma membrane	24.28	28.64
CDY36612	Canola	cytosol	15.64	27.94
TraesCS3A01G340700.1	Wheat	cytosol, extracellular, peroxisome	22.63	27.23
TraesCS5A01G557700.1	Wheat	cytosol	23.05	27.18
TraesCS5A01G145200.1	Wheat	cytosol	25.51	26.96
AT1G53890.3	Thale cress	cytosol	25.1	25.1
TraesCS4A01G192000.1	Wheat	cytosol	21.4	21.31
TraesCS3A01G340900.1	Wheat	mitochondrion	24.28	21.3
TraesCS5A01G144800.1	Wheat	nucleus	20.58	20.92
TraesCS3A01G296300.1	Wheat	cytosol	17.7	19.55
TraesCS1A01G328100.1	Wheat	cytosol	16.46	16.46
TraesCS5A01G145000.1	Wheat	nucleus, plastid	20.99	14.29
GSMUA_Achr3P24000_001	Banana	nucleus	39.09	11.5

Protein Annotations

EnsemblPlants:TraesCS4A01G142700.1	EnsemblPlantsGene:TraesCS4A01G142700	Gene3D:3.20.90.20	InterPro:IPR025659	InterPro:IPR038595	InterPro:LOR
InterPro:LOR_sf	InterPro:Tubby-like_C	PANTHER:PTHR31087	PANTHER:PTHR31087:SF51	PFAM:PF04525	SEG:seg
SUPFAM:SSF54518	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr4A:+:231019345..231020491

Molecular Weight (calculated)

26676.9 Da

IEP (calculated)

8.605

GRAVY (calculated)

-0.277

Length

243 amino acids

Sequence
(BLAST)

001: MGGARWCLGA ELWTPKVKVH SSASCSSQQR LLLQDTPAAG APPAAAAAGE GQVVKDQGEG EEHRSQQREV FTIWMKSLVL NGSGCTVFDS RGRIVYRVDN
101: YGSHRSVDVC LMDITGSVVL QVLKKFRRWE GYRCGGWEEP DQSAPWFTVV SNKWGRGPRC EFRSDGHAVR YKMDGGRRRQ QAARASWIVD DATGLAVAEV
201: KRKLTATGVS LGEDVLTLVV EPNVDHSLIM GLLVVHGLIN HSM

Best Arabidopsis Sequence Match ( AT3G14260.1 )
(BLAST)

001: MQIYRRPFET KTWQYRICPA ETMVKIHPDL TTSGAGEETS SPYLTTEQES FTIWMKSLVF NTNGCTVFDS KGNIIYRVDN YNSKSCREVY LMDLSGHVLF
101: TLRRQKFGLF KTWEGYRSSS ATVESTTKLE YFRVKNNVFQ VPNKDSSSSY RVNAGSCRND EQYCYKMVTR GSSLAIEDNC GKLLAEVKRK QSINGLKLGD
201: DVLTMMVESQ VDHSFIIGLV LAHSLINCIL

Arabidopsis Description

Protein LURP-one-related 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9LUM1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.