CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra001544.1-P	Field mustard	cytosol	89.13	98.56
CDX82489	Canola	cytosol	97.83	97.83
CDY33238	Canola	cytosol, peroxisome, plastid	82.17	82.17
AT3G14260.1	Thale cress	cytosol	80.87	80.87
CDY67855	Canola	peroxisome	80.43	80.43
CDY24068	Canola	peroxisome	50.87	58.21
CDY24067	Canola	cytosol	50.43	57.71
CDY24069	Canola	cytosol	43.48	57.14
CDY71164	Canola	cytosol, extracellular, peroxisome	46.96	56.25
CDY36610	Canola	cytosol	34.35	53.38
CDY36612	Canola	cytosol	27.83	47.06
KRH47711	Soybean	peroxisome	36.96	43.15
KRH06275	Soybean	peroxisome	37.39	42.79
TraesCS2A01G113800.1	Wheat	plastid	34.35	37.8
TraesCS2B01G132800.1	Wheat	plastid	34.78	37.38
HORVU2Hr1G019720.1	Barley	plastid	33.91	37.32
CDY49893	Canola	cytosol	30.87	37.17
CDY45367	Canola	cytosol	24.78	37.01
TraesCS2D01G114400.1	Wheat	plastid	34.35	36.57
EER99890	Sorghum	plastid	29.57	33.5
TraesCS4A01G142700.1	Wheat	mitochondrion, plastid	35.22	33.33
Os07t0672600-00	Rice	plastid	33.04	33.19
HORVU6Hr1G081400.1	Barley	mitochondrion	35.65	32.41
TraesCS4B01G155500.1	Wheat	cytosol, mitochondrion	35.22	32.4
TraesCS4D01G168500.1	Wheat	mitochondrion	35.22	31.4
Zm00001d029119_P001	Maize	mitochondrion	32.61	30.36
KXG39402	Sorghum	mitochondrion	33.91	30.23
CDX91482	Canola	cytosol	24.78	29.23
CDY62435	Canola	cytosol	24.35	28.72
CDY60759	Canola	cytosol	24.35	28.72
CDY07714	Canola	cytosol	24.35	28.72
CDY62436	Canola	cytosol	23.48	27.55
CDY18377	Canola	cytosol	23.48	27.55
CDY07715	Canola	cytosol	23.48	27.55
CDY41119	Canola	cytosol	24.78	27.14
CDY37567	Canola	cytosol	24.78	27.14
CDX93313	Canola	cytosol	23.04	27.04
CDY58464	Canola	cytosol	22.17	23.94
CDX75845	Canola	cytosol	22.17	23.94
CDY30113	Canola	cytosol	22.17	23.29
CDX87294	Canola	cytosol	23.91	21.4
GSMUA_Achr3P24000_001	Banana	nucleus	33.48	9.32

Protein Annotations

EnsemblPlants:CDX75761	EnsemblPlantsGene:GSBRNA2T00123695001	Gene3D:3.20.90.20	InterPro:IPR025659	InterPro:IPR038595	InterPro:LOR
InterPro:LOR_sf	InterPro:Tubby-like_C	PANTHER:PTHR31087	PANTHER:PTHR31087:SF30	PFAM:PF04525	ProteinID:CDX75761
ProteinID:CDX75761.1	SUPFAM:SSF54518	UniParc:UPI0004EDC46E	MapMan:35.1	:	:

Description

BnaC03g38440D

Coordinates

chrLK031805:-:386891..387677

Molecular Weight (calculated)

26424.5 Da

IEP (calculated)

9.448

GRAVY (calculated)

-0.499

Length

230 amino acids

Sequence
(BLAST)

001: MQISRQPYET KPWQNRICPK ETMVKIHPDH TTSGAGDITS SPYLTTEKES FTIWMKSLVF NTNGCTVFDC KGNIIYRVDN YNSKSCREVY LMDLHGHVLF
101: TLRSQKFGLF KTWEGYRSPS GTSDSTTNSE YFRVKSNIFQ VPSKDSYSSY RVLTGSCRKN EQYHYKIVTR GSSLGIEDIC GRVVAEVKRK QSRKGLEFGD
201: DVLTMVVESQ VDHSFIIGLV ITHRLINRKL

Best Arabidopsis Sequence Match ( AT3G14260.1 )
(BLAST)

001: MQIYRRPFET KTWQYRICPA ETMVKIHPDL TTSGAGEETS SPYLTTEQES FTIWMKSLVF NTNGCTVFDS KGNIIYRVDN YNSKSCREVY LMDLSGHVLF
101: TLRRQKFGLF KTWEGYRSSS ATVESTTKLE YFRVKNNVFQ VPNKDSSSSY RVNAGSCRND EQYCYKMVTR GSSLAIEDNC GKLLAEVKRK QSINGLKLGD
201: DVLTMMVESQ VDHSFIIGLV LAHSLINCIL

Arabidopsis Description

Protein LURP-one-related 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9LUM1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.