Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 3
- cytosol 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra027804.1-P | Field mustard | cytosol | 97.4 | 78.53 |
| CDY49893 | Canola | cytosol | 97.4 | 78.53 |
| AT1G63410.2 | Thale cress | cytosol | 90.26 | 64.65 |
| KRH41152 | Soybean | cytosol | 33.12 | 34.23 |
| VIT_02s0025g03730.t01 | Wine grape | cytosol | 42.86 | 32.67 |
| Solyc12g056310.1.1 | Tomato | plastid | 41.56 | 32.49 |
| VIT_02s0025g03740.t01 | Wine grape | plastid | 42.86 | 32.04 |
| KRH27952 | Soybean | cytosol | 39.61 | 31.61 |
| VIT_02s0025g03750.t01 | Wine grape | cytosol | 42.21 | 30.95 |
| PGSC0003DMT400007876 | Potato | plastid | 40.26 | 30.85 |
| PGSC0003DMT400014913 | Potato | plastid | 41.56 | 30.77 |
| KRH77515 | Soybean | cytosol | 38.31 | 30.41 |
| Solyc08g080750.2.1 | Tomato | plastid | 39.61 | 30.2 |
| KRH59852 | Soybean | cytosol | 38.31 | 30.1 |
| Solyc08g080760.1.1 | Tomato | mitochondrion | 38.31 | 29.65 |
| Solyc08g007980.2.1 | Tomato | plastid | 39.61 | 29.33 |
| CDY36612 | Canola | cytosol | 25.32 | 28.68 |
| Solyc08g080770.2.1 | Tomato | plastid | 38.31 | 27.83 |
| TraesCS2A01G113800.1 | Wheat | plastid | 37.66 | 27.75 |
| PGSC0003DMT400032165 | Potato | cytosol | 31.17 | 27.75 |
| PGSC0003DMT400032166 | Potato | plastid | 37.66 | 27.36 |
| HORVU2Hr1G019720.1 | Barley | plastid | 37.01 | 27.27 |
| EER99890 | Sorghum | plastid | 35.71 | 27.09 |
| TraesCS2D01G114400.1 | Wheat | plastid | 37.66 | 26.85 |
| TraesCS2B01G132800.1 | Wheat | plastid | 36.36 | 26.17 |
| PGSC0003DMT400010898 | Potato | cytosol | 21.43 | 25.98 |
| CDY24067 | Canola | cytosol | 33.12 | 25.37 |
| PGSC0003DMT400012847 | Potato | cytosol | 21.43 | 25.0 |
| CDY24068 | Canola | peroxisome | 32.47 | 24.88 |
| CDX75761 | Canola | cytosol | 37.01 | 24.78 |
| CDX82489 | Canola | cytosol | 37.01 | 24.78 |
| Os07t0672600-00 | Rice | plastid | 36.36 | 24.45 |
| CDY71164 | Canola | cytosol, extracellular, peroxisome | 29.87 | 23.96 |
| CDY60759 | Canola | cytosol | 29.87 | 23.59 |
| CDY67855 | Canola | peroxisome | 35.06 | 23.48 |
| CDY33238 | Canola | cytosol, peroxisome, plastid | 35.06 | 23.48 |
| CDX91482 | Canola | cytosol | 29.22 | 23.08 |
| CDY07714 | Canola | cytosol | 27.92 | 22.05 |
| CDY62435 | Canola | cytosol | 27.92 | 22.05 |
| CDY18377 | Canola | cytosol | 27.27 | 21.43 |
| CDY07715 | Canola | cytosol | 27.27 | 21.43 |
| CDX93313 | Canola | cytosol | 27.27 | 21.43 |
| CDY62436 | Canola | cytosol | 27.27 | 21.43 |
| CDY24069 | Canola | cytosol | 24.03 | 21.14 |
| Zm00001d029119_P001 | Maize | mitochondrion | 33.77 | 21.05 |
| KXG39402 | Sorghum | mitochondrion | 34.42 | 20.54 |
| TraesCS4A01G142700.1 | Wheat | mitochondrion, plastid | 30.52 | 19.34 |
| TraesCS4B01G155500.1 | Wheat | cytosol, mitochondrion | 30.52 | 18.8 |
| HORVU6Hr1G081400.1 | Barley | mitochondrion | 30.52 | 18.58 |
| TraesCS4D01G168500.1 | Wheat | mitochondrion | 30.52 | 18.22 |
| CDY37567 | Canola | cytosol | 24.03 | 17.62 |
| CDY41119 | Canola | cytosol | 24.03 | 17.62 |
| CDY36610 | Canola | cytosol | 16.88 | 17.57 |
| CDY58464 | Canola | cytosol | 24.03 | 17.37 |
| CDX75845 | Canola | cytosol | 24.03 | 17.37 |
| CDY30113 | Canola | cytosol | 24.68 | 17.35 |
| CDX87294 | Canola | cytosol | 22.73 | 13.62 |
| GSMUA_Achr3P24000_001 | Banana | nucleus | 37.66 | 7.02 |
Protein Annotations
| EnsemblPlants:CDY45367 | EnsemblPlantsGene:GSBRNA2T00081856001 | Gene3D:3.20.90.20 | InterPro:IPR025659 | InterPro:IPR038595 | InterPro:LOR |
| InterPro:LOR_sf | InterPro:Tubby-like_C | PANTHER:PTHR31087 | PANTHER:PTHR31087:SF25 | PFAM:PF04525 | ProteinID:CDY45367 |
| ProteinID:CDY45367.1 | SUPFAM:SSF54518 | UniParc:UPI0004EF4857 | UniProt:A0A078I5K8 | MapMan:35.1 | : |
Description
BnaA09g12520DBnaA09g12520D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I5K8]
Coordinates
chrLK032622:+:135656..136567
Molecular Weight (calculated)
18101.8 Da
IEP (calculated)
8.196
GRAVY (calculated)
-0.247
Length
154 amino acids
Sequence
(BLAST)
(BLAST)
001: MARVFPQAGV SSPYMSTERE TFTVWMKSLV YQTNGLTVYN SNGEITYRVE NYDKSSNEVH IMDLHGNILF TIRKKKLWLF GSWYVYRECG TLSSTEEVKP
101: FVKIKRSCIR DGDWEVRDET NEVFWILRFD PKFAFQIIDV HGNIIAKVDL LKLL
101: FVKIKRSCIR DGDWEVRDET NEVFWILRFD PKFAFQIIDV HGNIIAKVDL LKLL
001: MARVFPQAAI SSPYMSTERE TFTVWMKSLV YQTNGLTVYN SNGEITYRVE NYDKCSNEVH IMDLHGNILF TIRKKKLWLF GSWYVYRECG SFTSTEEVKP
101: CARIKRSSIR DGDWEVRDET NEVFWILRFD PKFAFQIIDI HGNIIAQVKP KQSSNGITLG EDVLTLEVKP RVDHSLVVTL VTVYGLIKGI DGEVKQLRDF
201: EEEEVAVGDE IAIEI
101: CARIKRSSIR DGDWEVRDET NEVFWILRFD PKFAFQIIDI HGNIIAQVKP KQSSNGITLG EDVLTLEVKP RVDHSLVVTL VTVYGLIKGI DGEVKQLRDF
201: EEEEVAVGDE IAIEI
Arabidopsis Description
Protein LURP-one-related 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SH27]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.