Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- extracellular 1
- golgi 1
- plasma membrane 1
- endoplasmic reticulum 1
- vacuole 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G557700.1 | Wheat | cytosol | 93.33 | 95.15 |
| TraesCS4B01G396800.1 | Wheat | plastid | 93.81 | 92.92 |
| Os05t0311500-01 | Rice | cytosol | 71.9 | 70.23 |
| GSMUA_Achr11P... | Banana | cytosol | 47.62 | 50.51 |
| GSMUA_Achr7P21880_001 | Banana | cytosol | 48.1 | 50.0 |
| VIT_08s0032g00760.t01 | Wine grape | cytosol | 46.67 | 49.0 |
| GSMUA_Achr4P02410_001 | Banana | cytosol, peroxisome, plastid | 47.62 | 48.08 |
| CDY07714 | Canola | cytosol | 43.81 | 47.18 |
| CDY62435 | Canola | cytosol | 43.81 | 47.18 |
| CDY62436 | Canola | cytosol | 43.81 | 46.94 |
| Bra000080.1-P | Field mustard | cytosol | 43.33 | 46.67 |
| Bra000079.1-P | Field mustard | cytosol | 43.33 | 46.43 |
| CDY07715 | Canola | cytosol | 43.33 | 46.43 |
| CDX91482 | Canola | cytosol | 42.86 | 46.15 |
| AT2G38640.1 | Thale cress | cytosol | 42.86 | 45.92 |
| Bra005092.1-P | Field mustard | cytosol | 42.38 | 45.64 |
| GSMUA_Achr10P... | Banana | plastid | 45.24 | 45.45 |
| Bra017111.1-P | Field mustard | cytosol | 42.38 | 45.41 |
| VIT_08s0056g00180.t01 | Wine grape | cytosol | 46.19 | 44.91 |
| CDY18377 | Canola | cytosol | 41.9 | 44.9 |
| CDY60759 | Canola | cytosol | 41.43 | 44.62 |
| CDX93313 | Canola | cytosol | 41.43 | 44.39 |
| KRH09578 | Soybean | cytosol | 41.9 | 42.31 |
| GSMUA_Achr11P... | Banana | cytosol | 45.71 | 40.85 |
| HORVU4Hr1G089220.1 | Barley | plasma membrane | 48.1 | 38.55 |
Protein Annotations
| EnsemblPlants:TraesCSU01G031000.1 | EnsemblPlantsGene:TraesCSU01G031000 | Gene3D:3.20.90.20 | InterPro:IPR025659 | InterPro:IPR038595 | InterPro:LOR |
| InterPro:LOR_sf | InterPro:Tubby-like_C | PANTHER:PTHR31087 | PANTHER:PTHR31087:SF29 | PFAM:PF04525 | SEG:seg |
| SUPFAM:SSF54518 | MapMan:35.1 | : | : | : | : |
Description
No Description!
Coordinates
chrUn:-:29185116..29186316
Molecular Weight (calculated)
23062.7 Da
IEP (calculated)
9.823
GRAVY (calculated)
-0.185
Length
210 amino acids
Sequence
(BLAST)
(BLAST)
001: MNKIKVHPNV AAASLAVSAA EEKGEAVSLT VWRRSLLFNG KGFTVFDTNG NLVFRVETYS RGSPREVVLM DAHGLALLTV RRKKLSLAEE WLVYDGDGDE
101: PAPRRFTARR NRSLLRTKSL ARLSPPRSLD GTGDAPGCRY DVEGSYAGRS LDMFACTSWA SGGNQRRRVA TVCRKEAAVG LDVFRLIVEP DFEPALAMAM
201: VILLDQMNAS
101: PAPRRFTARR NRSLLRTKSL ARLSPPRSLD GTGDAPGCRY DVEGSYAGRS LDMFACTSWA SGGNQRRRVA TVCRKEAAVG LDVFRLIVEP DFEPALAMAM
201: VILLDQMNAS
001: MTKVHPKFPS TCEESLCDSK AAVVLTVWKK SLLFNCDGFT VYNANGELVF RVDNYMNCPR DNIVLMDASG FPLLSIRRKK LSLGDCWMVY DGETERDPIF
101: TARKNVSIIS NRKSLAWVSA KKTVLYEIEG SYGQRSCKIL DERRNKKKTA EIKRKETVIG GVAFGKDVYK LIVESEMEPR VAMALTIILD QMFRSS
101: TARKNVSIIS NRKSLAWVSA KKTVLYEIEG SYGQRSCKIL DERRNKKKTA EIKRKETVIG GVAFGKDVYK LIVESEMEPR VAMALTIILD QMFRSS
Arabidopsis Description
Protein LURP-one-related 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVI6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.