Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- vacuole 1
- cytosol 3
- plasma membrane 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os05t0491100-01 | Rice | cytosol, extracellular | 54.3 | 55.03 |
| Os01t0267900-01 | Rice | cytosol | 53.64 | 54.36 |
| Os03t0319300-01 | Rice | cytosol, extracellular, nucleus | 53.64 | 54.36 |
| Os07t0687200-02 | Rice | cytosol | 53.64 | 54.36 |
| Os01t0279300-01 | Rice | cytosol, plasma membrane, plastid | 52.32 | 53.02 |
| Os03t0743500-02 | Rice | nucleus | 48.34 | 47.4 |
| Os12t0603800-00 | Rice | cytosol | 49.01 | 44.58 |
| Os01t0810300-01 | Rice | plasma membrane | 52.98 | 42.78 |
| Os10t0389000-01 | Rice | plasma membrane | 41.72 | 32.98 |
| Os08t0117400-01 | Rice | plasma membrane | 31.79 | 32.43 |
| Os05t0491000-01 | Rice | cytosol | 33.11 | 32.26 |
| Os05t0577500-01 | Rice | cytosol, mitochondrion | 35.1 | 30.64 |
| Os07t0618800-01 | Rice | plasma membrane | 39.07 | 28.23 |
| Os01t0505600-01 | Rice | cytosol | 37.09 | 26.54 |
| Os01t0604500-01 | Rice | cytosol | 37.75 | 22.89 |
Protein Annotations
| EnsemblPlants:Os11t0586200-00 | EnsemblPlantsGene:Os11g0586200 | Gene3D:1.10.238.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005509 |
| GO:GO:0046872 | InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom | InterPro:IPR002048 | PANTHER:PTHR23050 |
| PANTHER:PTHR23050:SF324 | PFAM:PF13499 | PFscan:PS50222 | ProteinID:BAT14636.1 | ScanProsite:PS00018 | SEG:seg |
| SMART:SM00054 | SUPFAM:SSF47473 | UniParc:UPI00039392F9 | UniProt:A0A0P0Y450 | MapMan:35.1 | : |
Description
CALMODULIN-LIKE PROTEIN 6Similar to Calmodulin. (Os11t0586200-00)
Coordinates
chr11:-:22173768..22174764
Molecular Weight (calculated)
17325.1 Da
IEP (calculated)
3.894
GRAVY (calculated)
-0.680
Length
151 amino acids
Sequence
(BLAST)
(BLAST)
001: MESHLNEQQI SDFRDAFSLF DKNNDGCISR EELATVLTRL GMAPSQEDLQ DMIVAVDEDG NGTIEFDEFL AIMKKKLYND KGDDEEELRK AFRIFDKDDN
101: GFISRNEVCM VMASLGEEMT EDEIDDMMKA ADSNNDGQVD YEEFKRVMMS T
101: GFISRNEVCM VMASLGEEMT EDEIDDMMKA ADSNNDGQVD YEEFKRVMMS T
001: MADQLTDDQI SEFKEAFSLF DKDGDGCITT KELGTVMRSL GQNPTEAELQ DMINEVDADG NGTIDFPEFL NLMARKMKDT DSEEELKEAF RVFDKDQNGF
101: ISAAELRHVM TNLGEKLTDE EVDEMIKEAD VDGDGQINYE EFVKVMMAK
101: ISAAELRHVM TNLGEKLTDE EVDEMIKEAD VDGDGQINYE EFVKVMMAK
Arabidopsis Description
CAM5Calmodulin 5 [Source:UniProtKB/TrEMBL;Acc:F4IVN6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.