Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G512700.1 | Wheat | cytosol | 69.08 | 75.42 |
| Zm00001d040624_P001 | Maize | cytosol | 64.12 | 75.0 |
| KXG32375 | Sorghum | cytosol | 65.27 | 74.35 |
| TraesCS2A01G486100.1 | Wheat | mitochondrion | 69.08 | 72.69 |
| Zm00001d009087_P001 | Maize | cytosol | 61.83 | 72.0 |
| HORVU2Hr1G108600.1 | Barley | cytosol | 31.3 | 64.06 |
| KRH52855 | Soybean | cytosol | 23.66 | 37.13 |
| Bra019973.1-P | Field mustard | cytosol, plastid | 26.34 | 30.0 |
| CDX93460 | Canola | cytosol, plastid | 26.34 | 30.0 |
| Solyc02g076640.1.1 | Tomato | cytosol | 9.92 | 29.89 |
| CDX94928 | Canola | plastid | 25.95 | 29.57 |
| Bra013337.1-P | Field mustard | cytosol | 22.52 | 29.06 |
| AT4G18650.1 | Thale cress | cytosol | 25.57 | 28.88 |
| PGSC0003DMT400011369 | Potato | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 26.34 | 28.75 |
| AT1G09950.1 | Thale cress | cytosol | 24.81 | 28.26 |
| PGSC0003DMT400028833 | Potato | cytosol | 26.72 | 28.23 |
| Solyc10g085210.1.1 | Tomato | cytosol | 26.34 | 28.05 |
| CDY22613 | Canola | cytosol, plastid | 24.81 | 28.02 |
| PGSC0003DMT400028832 | Potato | cytosol | 11.83 | 27.93 |
| Bra031691.1-P | Field mustard | plastid | 24.43 | 27.71 |
| CDX78882 | Canola | cytosol | 25.19 | 27.62 |
| Solyc09g005610.2.1 | Tomato | cytosol | 25.19 | 27.5 |
| CDX99446 | Canola | cytosol | 24.81 | 27.2 |
| AT1G58330.1 | Thale cress | cytosol | 22.52 | 26.22 |
| Os05t0560200-00 | Rice | mitochondrion | 22.14 | 26.01 |
| KRH21250 | Soybean | cytosol | 24.81 | 25.59 |
| KRH00273 | Soybean | cytosol | 22.52 | 25.43 |
| KRH49400 | Soybean | cytosol | 22.52 | 25.32 |
| Solyc02g073580.1.1 | Tomato | cytosol | 20.23 | 24.2 |
| PGSC0003DMT400026417 | Potato | cytosol | 20.23 | 23.87 |
| KRH11036 | Soybean | plastid | 26.34 | 23.79 |
| PGSC0003DMT400012745 | Potato | cytosol | 21.37 | 23.73 |
| Solyc04g076970.2.1 | Tomato | nucleus | 21.76 | 23.46 |
| Os01t0159000-01 | Rice | plastid | 15.27 | 22.1 |
Protein Annotations
| MapMan:15.5.4.5 | UniProt:A0A0N7KCU0 | ProteinID:BAS71753.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | InterPro:IPR025422 | EnsemblPlantsGene:Os01g0306400 | EnsemblPlants:Os01t0306400-01 |
| PFAM:PF14144 | PFscan:PS51806 | PANTHER:PTHR22952 | PANTHER:PTHR22952:SF145 | InterPro:TGA_domain | UniParc:UPI000393A832 |
| SEG:seg | : | : | : | : | : |
Description
OsDOG1-like-1Hypothetical conserved gene. (Os01t0306400-01)
Coordinates
chr1:+:11378620..11380071
Molecular Weight (calculated)
28942.6 Da
IEP (calculated)
11.153
GRAVY (calculated)
-0.396
Length
262 amino acids
Sequence
(BLAST)
(BLAST)
001: AKKPRPIYAG PGWEGQRMPA SYLQPRRGTN GRRIMEHGAG EEMVAFYEAW VGREERIVAD LTDALLPARR RRDVLAPLVD AAVGHVSEYY ERKARLADRD
101: VVAALDPRWL NPLERTFLWA WGWKPALVFR FADGAVAGGS SHQQQRRALE RVRAATAEAE REVDREVAVV QESLAGPRVL AALRRQHPRN GEADEAVAAV
201: GRSLRVLLAA ADALRERTVR DVVGTLAPDQ AGAFLAAMLR FHLGVHRAGR NWGSGNGGRR GL
101: VVAALDPRWL NPLERTFLWA WGWKPALVFR FADGAVAGGS SHQQQRRALE RVRAATAEAE REVDREVAVV QESLAGPRVL AALRRQHPRN GEADEAVAAV
201: GRSLRVLLAA ADALRERTVR DVVGTLAPDQ AGAFLAAMLR FHLGVHRAGR NWGSGNGGRR GL
001: MSKMRNLVEE KFLEFYESWV IQLELYLHQL LIAHNNNTMS ETELRHLISK LTTHHKAYYT AKWAAIREDV LAFFGSVWLN PLENACSWLT GWKPSMVFRM
101: VDRLRKSRVV LVEAQVKKLE ELRVKTKFDE QKIEREMERY QVAMADRKMV ELARLGCHVG GESVMVVEAA VRGLSMGLEK MVKAADCVRL KTLKGILDIL
201: TPPQCVEFLA AAATFQVQLR RWGNRRHYVT HS
101: VDRLRKSRVV LVEAQVKKLE ELRVKTKFDE QKIEREMERY QVAMADRKMV ELARLGCHVG GESVMVVEAA VRGLSMGLEK MVKAADCVRL KTLKGILDIL
201: TPPQCVEFLA AAATFQVQLR RWGNRRHYVT HS
Arabidopsis Description
DOGL4Protein DOG1-like 4 [Source:UniProtKB/Swiss-Prot;Acc:Q84JC2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.