Factsheet for Os05t0560200-00

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
cytosol 1
mitochondrion 5
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G400300.1	Wheat	mitochondrion	81.61	80.53
TraesCS1B01G420300.1	Wheat	mitochondrion	81.61	80.53
TraesCS1A01G392200.1	Wheat	mitochondrion	81.17	80.09
HORVU1Hr1G086580.1	Barley	mitochondrion	79.37	77.63
Zm00001d038990_P001	Maize	cytosol, mitochondrion	80.72	77.59
EES19938	Sorghum	cytosol, mitochondrion	80.27	77.49
GSMUA_Achr1P11520_001	Banana	cytosol	51.12	50.44
VIT_19s0014g01450.t01	Wine grape	cytosol, mitochondrion, peroxisome	39.01	38.33
VIT_19s0014g01210.t01	Wine grape	cytosol	37.22	35.93
AT3G14880.1	Thale cress	nucleus	37.22	34.02
Bra027297.1-P	Field mustard	nucleus	35.43	33.33
CDX97614	Canola	nucleus	35.43	33.33
Solyc07g062380.1.1	Tomato	nucleus	33.63	33.19
PGSC0003DMT400018207	Potato	nucleus	25.56	32.95
CDY70896	Canola	nucleus	34.98	32.91
CDX98510	Canola	nucleus	34.98	32.91
Os01t0159000-01	Rice	plastid	25.11	30.94
Solyc12g014300.1.1	Tomato	cytosol	21.52	29.63
PGSC0003DMT400039657	Potato	cytosol	29.6	29.46
KRH21958	Soybean	cytosol	33.63	27.99
Os01t0306400-01	Rice	nucleus	26.01	22.14

Protein Annotations

MapMan:15.5.4.5	EntrezGene:4339595	ProteinID:BAF18220.1	ProteinID:BAS95311.1	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	GO:GO:0006139	GO:GO:0006351	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009628	GO:GO:0009987	GO:GO:0043565	GO:GO:0080167	InterPro:IPR025422
EnsemblPlantsGene:Os05g0560200	EnsemblPlants:Os05t0560200-00	PFAM:PF14144	PFscan:PS51806	PANTHER:PTHR22952	PANTHER:PTHR22952:SF268
UniProt:Q0DG03	InterPro:TGA_domain	UniParc:UPI0000E125E2	RefSeq:XP_015638156.1	SEG:seg	:

Description

OsDOG1-like-3Similar to tumor-related protein-like. (Os05t0560200-00)

Coordinates

chr5:-:27883739..27884410

Molecular Weight (calculated)

24385.2 Da

IEP (calculated)

6.143

GRAVY (calculated)

-0.095

Length

223 amino acids

Sequence
(BLAST)

001: MEVEAATRRF HLWLRGLRGL RRELRAARWA DDPAQLGSLV GRFVAHVECY TAARAEMDPV WTLSAPWASP VERGAAYWLA GWRPTTLVHL LYTESGRRFE
101: AQLPDLLLGV SSGNLGDLSP SQLAQIDDLQ RRTVAEEDGL SREMALVQEG HGAVAVGGGI DVDGIVGRVR GVLGRADALR LRTVKRAVEI LEPAQAAELL
201: VAAADMEIGF REFGLKYSSA RSD

Best Arabidopsis Sequence Match ( AT3G14880.2 )
(BLAST)

001: MSQETAIASF KKFQQSWIEQ LRNHLNHLRS AQNHHRNSAT GDEERLREAV DRVMEHFREY HRAKWAATDK DVIEVMASPW ASALERSLQW VGGWRPTTLF
101: HLVYTESSIL FESRIVDILR GFRTGDLSDL SPSQFRTVSE LQCETVKEEN AITEELSEWQ DDASDLVMGT SSDPDQRIRR LAEIVHRTDD LRLRTITRVV
201: EVLSPLQQAE FLVAAAELRT GVAGWGTSHD RRRSSEV

Arabidopsis Description

DNA-binding protein-like protein [Source:UniProtKB/TrEMBL;Acc:Q9LKB6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.