Factsheet for HORVU1Hr1G086580.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion
MultiLoc:	mitochondrion
TargetP:	mitochondrion
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G400300.1	Wheat	mitochondrion	96.49	97.35
TraesCS1B01G420300.1	Wheat	mitochondrion	96.49	97.35
TraesCS1A01G392200.1	Wheat	mitochondrion	96.05	96.9
Os05t0560200-00	Rice	mitochondrion	77.63	79.37
EES19938	Sorghum	cytosol, mitochondrion	75.44	74.46
Zm00001d038990_P001	Maize	cytosol, mitochondrion	75.44	74.14
GSMUA_Achr1P11520_001	Banana	cytosol	52.19	52.65
VIT_19s0014g01450.t01	Wine grape	cytosol, mitochondrion, peroxisome	40.79	40.97
VIT_19s0014g01210.t01	Wine grape	cytosol	38.16	37.66
HORVU3Hr1G018820.1	Barley	extracellular	27.19	35.03
PGSC0003DMT400018207	Potato	nucleus	25.88	34.1
Solyc07g062380.1.1	Tomato	nucleus	33.77	34.07
AT3G14880.1	Thale cress	nucleus	36.4	34.02
CDX97614	Canola	nucleus	34.65	33.33
Bra027297.1-P	Field mustard	nucleus	34.65	33.33
CDY70896	Canola	nucleus	34.21	32.91
CDX98510	Canola	nucleus	34.21	32.91
Solyc12g014300.1.1	Tomato	cytosol	21.93	30.86
PGSC0003DMT400039657	Potato	cytosol	29.39	29.91
KRH21958	Soybean	cytosol	33.33	28.36
HORVU2Hr1G108600.1	Barley	cytosol	10.96	19.53

Protein Annotations

MapMan:15.5.4.5	UniProt:A0A287GLD6	ncoils:Coil	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0006139	GO:GO:0006351	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009628	GO:GO:0009987	GO:GO:0043565	GO:GO:0080167	EnsemblPlantsGene:HORVU1Hr1G086580	EnsemblPlants:HORVU1Hr1G086580.1
InterPro:IPR025422	PFAM:PF14144	PFscan:PS51806	PANTHER:PTHR22952	PANTHER:PTHR22952:SF268	InterPro:TGA_domain
UniParc:UPI000B4803E4	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chrchr1H:+:537683703..537684389

Molecular Weight (calculated)

24811.7 Da

IEP (calculated)

5.805

GRAVY (calculated)

-0.110

Length

228 amino acids

Sequence
(BLAST)

001: RAMELEAARR RFQLWLRGLR SLRRDLRTAR WADDPAQLAK LVAGYVSHFA DYCAARAELD PVWTLAAPWA SPVERGAAHW LAGWRPTTLV HLLYTESGRR
101: FEAQLPDLLL GVRSGNLGDL SPAQLAQIDE LQRRTVAQED ELSREMARVQ EGDGLVGAGG ELLDVGGLVG RVGAVVAGAD ALRLRTMKRA VEILEPAQAS
201: ELLVAAADME IGFREFGLKY DGVGAGGS

Best Arabidopsis Sequence Match ( AT3G14880.2 )
(BLAST)

001: MSQETAIASF KKFQQSWIEQ LRNHLNHLRS AQNHHRNSAT GDEERLREAV DRVMEHFREY HRAKWAATDK DVIEVMASPW ASALERSLQW VGGWRPTTLF
101: HLVYTESSIL FESRIVDILR GFRTGDLSDL SPSQFRTVSE LQCETVKEEN AITEELSEWQ DDASDLVMGT SSDPDQRIRR LAEIVHRTDD LRLRTITRVV
201: EVLSPLQQAE FLVAAAELRT GVAGWGTSHD RRRSSEV

Arabidopsis Description

DNA-binding protein-like protein [Source:UniProtKB/TrEMBL;Acc:Q9LKB6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.