Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G400300.1 | Wheat | mitochondrion | 99.56 | 99.56 |
| TraesCS1B01G420300.1 | Wheat | mitochondrion | 99.11 | 99.11 |
| HORVU1Hr1G086580.1 | Barley | mitochondrion | 96.9 | 96.05 |
| Os05t0560200-00 | Rice | mitochondrion | 80.09 | 81.17 |
| EES19938 | Sorghum | cytosol, mitochondrion | 77.43 | 75.76 |
| Zm00001d038990_P001 | Maize | cytosol, mitochondrion | 76.99 | 75.0 |
| GSMUA_Achr1P11520_001 | Banana | cytosol | 52.65 | 52.65 |
| VIT_19s0014g01450.t01 | Wine grape | cytosol, mitochondrion, peroxisome | 41.59 | 41.41 |
| VIT_19s0014g01210.t01 | Wine grape | cytosol | 38.05 | 37.23 |
| Solyc07g062380.1.1 | Tomato | nucleus | 34.51 | 34.51 |
| PGSC0003DMT400018207 | Potato | nucleus | 26.11 | 34.1 |
| AT3G14880.1 | Thale cress | nucleus | 36.73 | 34.02 |
| Bra027297.1-P | Field mustard | nucleus | 34.96 | 33.33 |
| CDX97614 | Canola | nucleus | 34.96 | 33.33 |
| CDY70896 | Canola | nucleus | 34.51 | 32.91 |
| CDX98510 | Canola | nucleus | 34.51 | 32.91 |
| Solyc12g014300.1.1 | Tomato | cytosol | 22.12 | 30.86 |
| TraesCS3A01G103500.1 | Wheat | cytosol | 35.4 | 30.77 |
| PGSC0003DMT400039657 | Potato | cytosol | 30.09 | 30.36 |
| KRH21958 | Soybean | cytosol | 33.63 | 28.36 |
| TraesCS2A01G010800.1 | Wheat | cytosol | 21.68 | 24.75 |
| TraesCS2A01G486100.1 | Wheat | mitochondrion | 26.11 | 23.69 |
| TraesCS3A01G306200.1 | Wheat | cytosol | 26.99 | 20.61 |
Protein Annotations
| MapMan:15.5.4.5 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009628 |
| GO:GO:0009987 | GO:GO:0043565 | GO:GO:0080167 | InterPro:IPR025422 | PFAM:PF14144 | PFscan:PS51806 |
| PANTHER:PTHR22952 | PANTHER:PTHR22952:SF268 | InterPro:TGA_domain | EnsemblPlantsGene:TraesCS1A01G392200 | EnsemblPlants:TraesCS1A01G392200.1 | SEG:seg |
Description
No Description!
Coordinates
chr1A:-:558704531..558705211
Molecular Weight (calculated)
24451.2 Da
IEP (calculated)
5.379
GRAVY (calculated)
-0.073
Length
226 amino acids
Sequence
(BLAST)
(BLAST)
001: MELEAATRRF QLWLRGLRSL RRDLRTARWA DDPAQLAKLV AGYVSHFADY CAARAELDPV WTLAAPWASP VERGAAHWLA GWRPTTLVHL LYTESGNRFE
101: AQLPDLLLGV RSGNLGDLSP AQLAQIDELQ RRTVAQEDEL SREMARVQEG HGAVGAGGEL VDVGGLVGRV GAVLAGADAL RLRTMKRAVE ILEPAQAAEL
201: LVAAADMEIG FREFGLKYDG VGAGGS
101: AQLPDLLLGV RSGNLGDLSP AQLAQIDELQ RRTVAQEDEL SREMARVQEG HGAVGAGGEL VDVGGLVGRV GAVLAGADAL RLRTMKRAVE ILEPAQAAEL
201: LVAAADMEIG FREFGLKYDG VGAGGS
001: MSQETAIASF KKFQQSWIEQ LRNHLNHLRS AQNHHRNSAT GDEERLREAV DRVMEHFREY HRAKWAATDK DVIEVMASPW ASALERSLQW VGGWRPTTLF
101: HLVYTESSIL FESRIVDILR GFRTGDLSDL SPSQFRTVSE LQCETVKEEN AITEELSEWQ DDASDLVMGT SSDPDQRIRR LAEIVHRTDD LRLRTITRVV
201: EVLSPLQQAE FLVAAAELRT GVAGWGTSHD RRRSSEV
101: HLVYTESSIL FESRIVDILR GFRTGDLSDL SPSQFRTVSE LQCETVKEEN AITEELSEWQ DDASDLVMGT SSDPDQRIRR LAEIVHRTDD LRLRTITRVV
201: EVLSPLQQAE FLVAAAELRT GVAGWGTSHD RRRSSEV
Arabidopsis Description
DNA-binding protein-like protein [Source:UniProtKB/TrEMBL;Acc:Q9LKB6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.