Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os01t0159000-01 | Rice | plastid | 50.0 | 54.7 |
| TraesCS3A01G103500.1 | Wheat | cytosol | 63.13 | 48.08 |
| Zm00001d039771_P001 | Maize | plastid | 50.51 | 36.76 |
| OQU86274 | Sorghum | plastid | 47.98 | 34.05 |
| GSMUA_Achr5P28280_001 | Banana | cytosol | 37.37 | 27.41 |
| KRH58220 | Soybean | cytosol | 24.24 | 25.0 |
| KRH59621 | Soybean | cytosol | 35.86 | 24.91 |
| VIT_07s0031g02670.t01 | Wine grape | nucleus | 31.82 | 24.71 |
| Solyc05g056410.1.1 | Tomato | cytosol | 32.32 | 23.44 |
| PGSC0003DMT400059950 | Potato | cytosol | 31.82 | 22.18 |
| TraesCS1A01G392200.1 | Wheat | mitochondrion | 24.75 | 21.68 |
| TraesCS3A01G306200.1 | Wheat | cytosol | 26.77 | 17.91 |
| KRH04319 | Soybean | cytosol | 17.17 | 16.11 |
| TraesCS2A01G486100.1 | Wheat | mitochondrion | 19.19 | 15.26 |
Protein Annotations
| EnsemblPlants:TraesCS2A01G010800.1 | EnsemblPlantsGene:TraesCS2A01G010800 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0043565 | InterPro:IPR025422 | InterPro:TGA_domain | PANTHER:PTHR22952 | PANTHER:PTHR22952:SF130 | PFAM:PF14144 |
| PFscan:PS51806 | SEG:seg | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chr2A:+:4113715..4114311
Molecular Weight (calculated)
21664.6 Da
IEP (calculated)
9.836
GRAVY (calculated)
-0.271
Length
198 amino acids
Sequence
(BLAST)
(BLAST)
001: MAQVILWADG SLAPNPDGGE SFAKFFEWWI LEQSRDLAAL RATATAQPDD ADPRRLVDRV LSHNEHYYRA KSAAASADVL LMFAPSWISV TESLYLWCGG
101: WRPTAAIQLL YSKSGVQLES QLPAFLEGGS LSAEQLLLHP AAARSYSARH GHTRSSSALA MRTPSRPLPG LAVSRPDELP RRQRRAVAAS DARARAGR
101: WRPTAAIQLL YSKSGVQLES QLPAFLEGGS LSAEQLLLHP AAARSYSARH GHTRSSSALA MRTPSRPLPG LAVSRPDELP RRQRRAVAAS DARARAGR
001: MSQETAIASF KKFQQSWIEQ LRNHLNHLRS AQNHHRNSAT GDEERLREAV DRVMEHFREY HRAKWAATDK DVIEVMASPW ASALERSLQW VGGWRPTTLF
101: HLVYTESSIL FESRIVDILR GFRTGDLSDL SPSQFRTVSE LQCETVKEEN AITEELSEWQ DDASDLVMGT SSDPDQRIRR LAEIVHRTDD LRLRTITRVV
201: EVLSPLQQAE FLVAAAELRT GVAGWGTSHD RRRSSEV
101: HLVYTESSIL FESRIVDILR GFRTGDLSDL SPSQFRTVSE LQCETVKEEN AITEELSEWQ DDASDLVMGT SSDPDQRIRR LAEIVHRTDD LRLRTITRVV
201: EVLSPLQQAE FLVAAAELRT GVAGWGTSHD RRRSSEV
Arabidopsis Description
DNA-binding protein-like protein [Source:UniProtKB/TrEMBL;Acc:Q9LKB6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.