CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH58220	Soybean	cytosol	48.07	71.35
KRH04319	Soybean	cytosol	44.91	60.66
VIT_07s0031g02670.t01	Wine grape	nucleus	49.82	55.69
Solyc05g056410.1.1	Tomato	cytosol	45.96	47.99
PGSC0003DMT400059950	Potato	cytosol	47.37	47.54
HORVU3Hr1G018820.1	Barley	extracellular	29.12	46.89
TraesCS3D01G105800.1	Wheat	cytosol	41.75	45.77
TraesCS3A01G103500.1	Wheat	cytosol	41.75	45.77
TraesCS3B01G120900.1	Wheat	cytosol	41.05	45.0
GSMUA_Achr5P28280_001	Banana	cytosol	42.46	44.81
Os01t0159000-01	Rice	plastid	28.07	44.2
Zm00001d039771_P001	Maize	plastid	38.95	40.81
OQU86274	Sorghum	plastid	36.84	37.63
TraesCS2A01G010800.1	Wheat	cytosol	24.91	35.86
KRH21958	Soybean	cytosol	30.88	32.84
KRH52855	Soybean	cytosol	18.95	32.34
KRH21250	Soybean	cytosol	28.77	32.28
KRH00273	Soybean	cytosol	25.96	31.9
KRH49400	Soybean	cytosol	25.96	31.76
KRH11036	Soybean	plastid	28.42	27.93

Protein Annotations

EntrezGene:100784399	MapMan:15.5.4.5	EMBL:ACUP02003335	EnsemblPlantsGene:GLYMA_05G195200	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	GO:GO:0006139	GO:GO:0006351	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:IPR025422	UniProt:K7KR83	EnsemblPlants:KRH59621
ProteinID:KRH59621	ProteinID:KRH59621.1	PFAM:PF14144	PFscan:PS51806	PANTHER:PTHR22952	PANTHER:PTHR22952:SF268
InterPro:TGA_domain	UniParc:UPI0001E24408	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr5:-:37952885..37953742

Molecular Weight (calculated)

32594.8 Da

IEP (calculated)

5.148

GRAVY (calculated)

-0.444

Length

285 amino acids

Sequence
(BLAST)

001: MSVVPCNCNH TTEKDNLSGE SESFHKFFEC WISEQKQHLK DLLAAESTQL ISDEELQALN DKVVEHYEYY YKAKSRCAKQ DVLAMLSPTW MSSLEEAFLW
101: IGGWRPSMAF HLIYSKSGLQ FEARLDEVLQ GLRTHDLGDL SASQLAQLDE MQRRTILEER EITDLMARHQ ETVADASMVE LSHVVSEMIR ANQRGEVDQS
201: KEIENKVEST LVLKEEGLEK ILLKADELRF ITLKDVVDVL TPKQAIHFLI AAAELHLRLH EWGKKMDARK CNQGFGEGKS HNSSS

Best Arabidopsis Sequence Match ( AT3G14880.2 )
(BLAST)

001: MSQETAIASF KKFQQSWIEQ LRNHLNHLRS AQNHHRNSAT GDEERLREAV DRVMEHFREY HRAKWAATDK DVIEVMASPW ASALERSLQW VGGWRPTTLF
101: HLVYTESSIL FESRIVDILR GFRTGDLSDL SPSQFRTVSE LQCETVKEEN AITEELSEWQ DDASDLVMGT SSDPDQRIRR LAEIVHRTDD LRLRTITRVV
201: EVLSPLQQAE FLVAAAELRT GVAGWGTSHD RRRSSEV

Arabidopsis Description

DNA-binding protein-like protein [Source:UniProtKB/TrEMBL;Acc:Q9LKB6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.