CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH58220	Soybean	cytosol	41.23	45.31
KRH59621	Soybean	cytosol	60.66	44.91
VIT_07s0031g02670.t01	Wine grape	nucleus	42.18	34.9
Solyc05g056410.1.1	Tomato	cytosol	36.97	28.57
PGSC0003DMT400059950	Potato	cytosol	36.49	27.11
TraesCS3A01G103500.1	Wheat	cytosol	32.7	26.54
TraesCS3D01G105800.1	Wheat	cytosol	32.23	26.15
TraesCS3B01G120900.1	Wheat	cytosol	31.75	25.77
Zm00001d039771_P001	Maize	plastid	32.23	25.0
GSMUA_Achr5P28280_001	Banana	cytosol	31.75	24.81
OQU86274	Sorghum	plastid	31.28	23.66
KRH21250	Soybean	cytosol	27.96	23.23
HORVU3Hr1G018820.1	Barley	extracellular	19.43	23.16
KRH00273	Soybean	cytosol	24.17	21.98
KRH49400	Soybean	cytosol	24.17	21.89
KRH52855	Soybean	cytosol	16.59	20.96
KRH11036	Soybean	plastid	27.96	20.34
KRH21958	Soybean	cytosol	24.17	19.03
Os01t0159000-01	Rice	plastid	15.64	18.23
TraesCS2A01G010800.1	Wheat	cytosol	16.11	17.17

Protein Annotations

MapMan:15.5.4.5	UniProt:A0A0R0FNW6	EMBL:ACUP02010398	EnsemblPlantsGene:GLYMA_17G154000	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	GO:GO:0006139	GO:GO:0006351	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:IPR025422	EnsemblPlants:KRH04319	ProteinID:KRH04319
ProteinID:KRH04319.1	PFscan:PS51806	PANTHER:PTHR22952	PANTHER:PTHR22952:SF268	InterPro:TGA_domain	UniParc:UPI0006EDA3AD

Description

hypothetical protein

Coordinates

chr17:+:12924078..12925703

Molecular Weight (calculated)

24441.4 Da

IEP (calculated)

6.373

GRAVY (calculated)

-0.388

Length

211 amino acids

Sequence
(BLAST)

001: MSVFRCTHTT EKDNYESFQE FFECWMFEQN QHLKELVAAE STTHLTDEKL QALNGKVVEH YEQYYNAKLC KARCVGHMQR RIIFEEREVT HLMESHQETV
101: ADAPIVELSH LRGEVGEDKE IEEKVIESAL VPLMEGLEQI LLKADELRLR TLKAIVNVLT PKQAIHFLIA DAELYLRVHE WGKKMDSRKG NHVLVRVQVS
201: HSSSKSKIAA L

Best Arabidopsis Sequence Match ( AT4G18650.1 )
(BLAST)

001: MSKMRNLVEE KFLEFYESWV IQLELYLHQL LIAHNNNTMS ETELRHLISK LTTHHKAYYT AKWAAIREDV LAFFGSVWLN PLENACSWLT GWKPSMVFRM
101: VDRLRKSRVV LVEAQVKKLE ELRVKTKFDE QKIEREMERY QVAMADRKMV ELARLGCHVG GESVMVVEAA VRGLSMGLEK MVKAADCVRL KTLKGILDIL
201: TPPQCVEFLA AAATFQVQLR RWGNRRHYVT HS

Arabidopsis Description

DOGL4Protein DOG1-like 4 [Source:UniProtKB/Swiss-Prot;Acc:Q84JC2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.