Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G103500.1 | Wheat | cytosol | 97.31 | 97.31 |
| TraesCS3B01G120900.1 | Wheat | cytosol | 97.31 | 97.31 |
| HORVU3Hr1G018820.1 | Barley | extracellular | 64.23 | 94.35 |
| Os01t0159000-01 | Rice | plastid | 49.62 | 71.27 |
| Zm00001d039771_P001 | Maize | plastid | 71.54 | 68.38 |
| OQU86274 | Sorghum | plastid | 67.69 | 63.08 |
| GSMUA_Achr5P28280_001 | Banana | cytosol | 52.69 | 50.74 |
| VIT_07s0031g02670.t01 | Wine grape | nucleus | 44.62 | 45.49 |
| KRH59621 | Soybean | cytosol | 45.77 | 41.75 |
| Solyc05g056410.1.1 | Tomato | cytosol | 42.31 | 40.29 |
| PGSC0003DMT400059950 | Potato | cytosol | 41.15 | 37.68 |
| KRH58220 | Soybean | cytosol | 27.31 | 36.98 |
| TraesCS1D01G400300.1 | Wheat | mitochondrion | 30.77 | 35.4 |
| KRH04319 | Soybean | cytosol | 26.15 | 32.23 |
| TraesCS3D01G295800.1 | Wheat | cytosol | 33.46 | 29.79 |
Protein Annotations
| MapMan:15.5.4.5 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 |
| InterPro:IPR025422 | PFAM:PF14144 | PFscan:PS51806 | PANTHER:PTHR22952 | PANTHER:PTHR22952:SF130 | InterPro:TGA_domain |
| EnsemblPlantsGene:TraesCS3D01G105800 | EnsemblPlants:TraesCS3D01G105800.1 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr3D:+:58107755..58108603
Molecular Weight (calculated)
27978.3 Da
IEP (calculated)
5.408
GRAVY (calculated)
-0.202
Length
260 amino acids
Sequence
(BLAST)
(BLAST)
001: MTATSRPQHP NGSLAPASDG GESFAKFFEC WILEQSRDLA ALRAAATARP DDADLRRLVD RVLGHYEHYY RAKSAAASAD VLPMFAPSWI SATESLYLWC
101: GGWRPTSAIQ LLYSKSGLQL EAQLPAFLDG GSLGDGDLGG LSAEQLQAAD QLQRRTIRRE REIEEAAAGA QESLATTKMV ELAGKGGMDA AEGMELEMDA
201: KAEAMKRVLE MADGLRLETL RGVVGLLRPA QAVHFLVAAA ELHLAVHKFG RRKDGAAAAE
101: GGWRPTSAIQ LLYSKSGLQL EAQLPAFLDG GSLGDGDLGG LSAEQLQAAD QLQRRTIRRE REIEEAAAGA QESLATTKMV ELAGKGGMDA AEGMELEMDA
201: KAEAMKRVLE MADGLRLETL RGVVGLLRPA QAVHFLVAAA ELHLAVHKFG RRKDGAAAAE
001: MSQETAIASF KKFQQSWIEQ LRNHLNHLRS AQNHHRNSAT GDEERLREAV DRVMEHFREY HRAKWAATDK DVIEVMASPW ASALERSLQW VGGWRPTTLF
101: HLVYTESSIL FESRIVDILR GFRTGDLSDL SPSQFRTVSE LQCETVKEEN AITEELSEWQ DDASDLVMGT SSDPDQRIRR LAEIVHRTDD LRLRTITRVV
201: EVLSPLQQAE FLVAAAELRT GVAGWGTSHD RRRSSEV
101: HLVYTESSIL FESRIVDILR GFRTGDLSDL SPSQFRTVSE LQCETVKEEN AITEELSEWQ DDASDLVMGT SSDPDQRIRR LAEIVHRTDD LRLRTITRVV
201: EVLSPLQQAE FLVAAAELRT GVAGWGTSHD RRRSSEV
Arabidopsis Description
DNA-binding protein-like protein [Source:UniProtKB/TrEMBL;Acc:Q9LKB6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.