Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc05g056410.1.1 | Tomato | cytosol | 54.12 | 50.55 |
| KRH59621 | Soybean | cytosol | 55.69 | 49.82 |
| PGSC0003DMT400059950 | Potato | cytosol | 54.51 | 48.94 |
| HORVU3Hr1G018820.1 | Barley | extracellular | 33.73 | 48.59 |
| GSMUA_Achr5P28280_001 | Banana | cytosol | 48.24 | 45.56 |
| TraesCS3D01G105800.1 | Wheat | cytosol | 45.49 | 44.62 |
| TraesCS3A01G103500.1 | Wheat | cytosol | 45.1 | 44.23 |
| KRH58220 | Soybean | cytosol | 32.94 | 43.75 |
| TraesCS3B01G120900.1 | Wheat | cytosol | 43.92 | 43.08 |
| VIT_19s0014g01450.t01 | Wine grape | cytosol, mitochondrion, peroxisome | 38.04 | 42.73 |
| KRH04319 | Soybean | cytosol | 34.9 | 42.18 |
| Os01t0159000-01 | Rice | plastid | 29.02 | 40.88 |
| Zm00001d039771_P001 | Maize | plastid | 42.35 | 39.71 |
| OQU86274 | Sorghum | plastid | 40.39 | 36.92 |
| VIT_19s0014g01210.t01 | Wine grape | cytosol | 33.33 | 36.8 |
| VIT_19s0014g01220.t01 | Wine grape | nucleus | 32.94 | 34.15 |
| TraesCS2A01G010800.1 | Wheat | cytosol | 24.71 | 31.82 |
Protein Annotations
| EntrezGene:100244104 | wikigene:100244104 | MapMan:15.5.4.5 | ProteinID:CBI21619 | ProteinID:CBI21619.3 | UniProt:D7SWH0 |
| EMBL:FN595233 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 |
| InterPro:IPR025422 | EntrezGene:LOC100244104 | wikigene:LOC100244104 | PFAM:PF14144 | PFscan:PS51806 | PANTHER:PTHR22952 |
| PANTHER:PTHR22952:SF268 | InterPro:TGA_domain | UniParc:UPI0001983AFA | ArrayExpress:VIT_07s0031g02670 | EnsemblPlantsGene:VIT_07s0031g02670 | EnsemblPlants:VIT_07s0031g02670.t01 |
| RefSeq:XP_002273632 | RefSeq:XP_002273632.1 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr7:+:19064850..19065745
Molecular Weight (calculated)
29063.4 Da
IEP (calculated)
5.669
GRAVY (calculated)
-0.521
Length
255 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSPANHEG FHKFFESWLT EQNQHLQELI SASRNNQHTD DSDQILCPLV ERVVSHYHNY YHAKSLSTRD NILSMLTPPW RSLLEDAFLW VGGWRPSVAF
101: HLLYSKSGLQ FESGLADLIR GLSTGDLGDM SHEQLCRVDE LQRKTIREER EMTENMARIQ ETVADSKMVE LSEAATEEGG GGDDLGERVE SALKHKEEGL
201: AEMLLKADDL RLRTLKGVLD ILTPMQCVHF LIAAAELHLR LHKWGKNKDE QQHHV
101: HLLYSKSGLQ FESGLADLIR GLSTGDLGDM SHEQLCRVDE LQRKTIREER EMTENMARIQ ETVADSKMVE LSEAATEEGG GGDDLGERVE SALKHKEEGL
201: AEMLLKADDL RLRTLKGVLD ILTPMQCVHF LIAAAELHLR LHKWGKNKDE QQHHV
001: MSQETAIASF KKFQQSWIEQ LRNHLNHLRS AQNHHRNSAT GDEERLREAV DRVMEHFREY HRAKWAATDK DVIEVMASPW ASALERSLQW VGGWRPTTLF
101: HLVYTESSIL FESRIVDILR GFRTGDLSDL SPSQFRTVSE LQCETVKEEN AITEELSEWQ DDASDLVMGT SSDPDQRIRR LAEIVHRTDD LRLRTITRVV
201: EVLSPLQQAE FLVAAAELRT GVAGWGTSHD RRRSSEV
101: HLVYTESSIL FESRIVDILR GFRTGDLSDL SPSQFRTVSE LQCETVKEEN AITEELSEWQ DDASDLVMGT SSDPDQRIRR LAEIVHRTDD LRLRTITRVV
201: EVLSPLQQAE FLVAAAELRT GVAGWGTSHD RRRSSEV
Arabidopsis Description
DNA-binding protein-like protein [Source:UniProtKB/TrEMBL;Acc:Q9LKB6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.