Factsheet for Zm00001d039771_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
cytosol 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	mitochondrion
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU86274	Sorghum	plastid	82.35	80.29
HORVU3Hr1G018820.1	Barley	extracellular	49.26	75.71
TraesCS3D01G105800.1	Wheat	cytosol	68.38	71.54
TraesCS3B01G120900.1	Wheat	cytosol	67.65	70.77
Os01t0159000-01	Rice	plastid	44.12	66.3
TraesCS2A01G010800.1	Wheat	cytosol	36.76	50.51
GSMUA_Achr5P28280_001	Banana	cytosol	47.43	47.78
VIT_07s0031g02670.t01	Wine grape	nucleus	39.71	42.35
KRH59621	Soybean	cytosol	40.81	38.95
Solyc05g056410.1.1	Tomato	cytosol	38.24	38.1
PGSC0003DMT400059950	Potato	cytosol	37.5	35.92
KRH58220	Soybean	cytosol	23.53	33.33
Zm00001d038990_P001	Maize	cytosol, mitochondrion	27.57	32.33
KRH04319	Soybean	cytosol	25.0	32.23
Zm00001d040624_P001	Maize	cytosol	23.16	28.12
Zm00001d009087_P001	Maize	cytosol	22.43	27.11
Zm00001d043390_P001	Maize	cytosol	27.21	24.92

Protein Annotations

EntrezGene:103649730	MapMan:15.5.4.5	UniProt:A0A1D6ML28	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0006139	GO:GO:0006351	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0043565	InterPro:IPR025422	ProteinID:ONM29916.1	PFAM:PF14144	PFscan:PS51806
PANTHER:PTHR22952	PANTHER:PTHR22952:SF130	InterPro:TGA_domain	UniParc:UPI00022091DA	EnsemblPlantsGene:Zm00001d039771	EnsemblPlants:Zm00001d039771_P001
EnsemblPlants:Zm00001d039771_T001	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr3:+:14423056..14424523

Molecular Weight (calculated)

29290.7 Da

IEP (calculated)

5.397

GRAVY (calculated)

-0.324

Length

272 amino acids

Sequence
(BLAST)

001: MAATTPAPPS HGGGRNGTLP PPLPSNESFS KFFESWISEQ SRDLEELRAA ASADPPAPES ELRRLVGQVL GHYAQYYRAK AAAAADDVLC MFTPSWTSTT
101: ENLYLWCGGW RPTAAIQLLY TKSGMQLQHQ LPAFLDGGGL KDDLGDLGAA QLQAADQLQR RTIRREREIE DAAASAQEAL TTATMVELAG GGGRDAGAMD
201: REMQAKAEGM RRVLEMADAL RLETMREVVA LLRPAQAVHF LLAAAELHLA VHDFGRRKDG RAGNVAAAAP PE

Best Arabidopsis Sequence Match ( AT4G18690.1 )
(BLAST)

001: MATSSSSYGI EQLQKGCYYE WMSVQAKHIV DLKEALMSHR SKEDHKLEEL VGKIVNDFQK YTEKRSELSR RSCSSYFAPS WNSPLENGLL WMGGCRPSSF
101: IRVIYSLCGS QAETQLSQYL LKIDENVEVN HGGSMSDLNA SQLAKINDLH IKVIEKEDKI TKKSANLQEN VADMPIAIAA YATDLMNGDV VVEDALDKYE
201: EGMAVLMVEA DKLRFETLRK IVDVVTPVQA AEFLLAGKRL HISLHEWGRV REEQRFGCVR TDAAAATGGA GTEKSKRSSL LM

Arabidopsis Description

DOGL3Protein DOG1-like 3 [Source:UniProtKB/Swiss-Prot;Acc:Q58FV0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.