Factsheet for TraesCS3B01G120900.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G105800.1	Wheat	cytosol	97.31	97.31
TraesCS3A01G103500.1	Wheat	cytosol	95.38	95.38
HORVU3Hr1G018820.1	Barley	extracellular	61.92	90.96
Os01t0159000-01	Rice	plastid	48.08	69.06
Zm00001d039771_P001	Maize	plastid	70.77	67.65
OQU86274	Sorghum	plastid	66.15	61.65
GSMUA_Achr5P28280_001	Banana	cytosol	52.69	50.74
VIT_07s0031g02670.t01	Wine grape	nucleus	43.08	43.92
KRH59621	Soybean	cytosol	45.0	41.05
Solyc05g056410.1.1	Tomato	cytosol	41.92	39.93
PGSC0003DMT400059950	Potato	cytosol	40.77	37.32
KRH58220	Soybean	cytosol	26.15	35.42
TraesCS1B01G420300.1	Wheat	mitochondrion	30.77	35.4
KRH04319	Soybean	cytosol	25.77	31.75
TraesCS3B01G330400.1	Wheat	cytosol	31.92	28.14
TraesCS2B01G512700.1	Wheat	cytosol	23.85	25.83

Protein Annotations

EnsemblPlants:TraesCS3B01G120900.1	EnsemblPlantsGene:TraesCS3B01G120900	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0006139	GO:GO:0006351	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0043565	InterPro:IPR025422	InterPro:TGA_domain	PANTHER:PTHR22952	PANTHER:PTHR22952:SF130	PFAM:PF14144
PFscan:PS51806	SEG:seg	MapMan:15.5.4.5	:	:	:

Description

No Description!

Coordinates

chr3B:+:91147473..91148321

Molecular Weight (calculated)

27939.2 Da

IEP (calculated)

5.391

GRAVY (calculated)

-0.181

Length

260 amino acids

Sequence
(BLAST)

001: MTATSRPQHP NGSLAPASDG GESFAKFFEC WILEQSRDLA ALRAAATARP DDSDLRRLVD RVLGHYEHYY RAKSAAASAD VLPMFAPSWI SATESLYLWC
101: GGWRPTSAIQ LLHSKSGLQL EAQLPAFLDG GSLGDGDLGG LSAEQLQAAD QLQRRTVRRE RAIEEVAAGA QESLATTKMV ELAGKGGMDA AEGMELEMDA
201: KAEAMKRVLE MADALRLETL RGVVGLLRPA QAVHFLVAAA ELHLAVHEFG RRKDGAAAAE

Best Arabidopsis Sequence Match ( AT3G14880.2 )
(BLAST)

001: MSQETAIASF KKFQQSWIEQ LRNHLNHLRS AQNHHRNSAT GDEERLREAV DRVMEHFREY HRAKWAATDK DVIEVMASPW ASALERSLQW VGGWRPTTLF
101: HLVYTESSIL FESRIVDILR GFRTGDLSDL SPSQFRTVSE LQCETVKEEN AITEELSEWQ DDASDLVMGT SSDPDQRIRR LAEIVHRTDD LRLRTITRVV
201: EVLSPLQQAE FLVAAAELRT GVAGWGTSHD RRRSSEV

Arabidopsis Description

DNA-binding protein-like protein [Source:UniProtKB/TrEMBL;Acc:Q9LKB6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.