Factsheet for TraesCS3B01G330400.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G295800.1	Wheat	cytosol	95.25	96.23
TraesCS3A01G306200.1	Wheat	cytosol	94.58	94.26
Zm00001d043390_P001	Maize	cytosol	61.02	60.61
OQU87585	Sorghum	cytosol	61.36	58.77
GSMUA_Achr4P08070_001	Banana	cytosol	31.86	41.41
VIT_19s0014g01220.t01	Wine grape	nucleus	33.9	40.65
PGSC0003DMT400088909	Potato	nucleus	28.47	34.43
Solyc03g006120.2.1	Tomato	cytosol, mitochondrion	23.05	34.17
PGSC0003DMT400073133	Potato	nucleus	32.2	33.93
Solyc02g073570.1.1	Tomato	nucleus	31.86	33.69
PGSC0003DMT400073292	Potato	cytosol	28.14	33.2
PGSC0003DMT400073296	Potato	nucleus	28.14	33.07
Bra013338.1-P	Field mustard	cytosol	28.14	32.94
PGSC0003DMT400068759	Potato	cytosol	26.1	32.91
Solyc02g072570.1.1	Tomato	cytosol	27.8	32.8
AT4G18680.1	Thale cress	cytosol	26.1	32.77
TraesCS3B01G120900.1	Wheat	cytosol	28.14	31.92
CDY52216	Canola	cytosol	29.15	30.71
CDY23102	Canola	nucleus	29.15	30.71
Bra017589.1-P	Field mustard	cytosol	29.15	30.71
CDX76507	Canola	nucleus	23.73	29.29
AT4G18690.1	Thale cress	cytosol	27.12	28.37
CDY70293	Canola	cytosol	23.73	28.23
Bra012582.1-P	Field mustard	cytosol	23.73	28.23
Bra025050.1-P	Field mustard	nucleus	26.78	28.21
CDY61468	Canola	cytosol	26.44	27.86
CDY58051	Canola	nucleus	26.44	27.86
CDX78883	Canola	cytosol, nucleus, plastid	11.53	27.2
TraesCS1B01G420300.1	Wheat	mitochondrion	20.34	26.55
CDY66844	Canola	cytosol	25.42	26.32
Bra020997.1-P	Field mustard	nucleus	25.08	25.78
CDX99444	Canola	cytosol, nucleus, plastid	11.19	25.19
AT5G45830.1	Thale cress	nucleus	26.78	24.46
CDY34053	Canola	cytosol	25.08	22.7
TraesCS2B01G512700.1	Wheat	cytosol	18.31	22.5

Protein Annotations

MapMan:15.5.4.5	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0006139
GO:GO:0006351	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565
InterPro:IPR025422	PFAM:PF14144	PFscan:PS51806	PANTHER:PTHR22952	PANTHER:PTHR22952:SF176	InterPro:TGA_domain
EnsemblPlantsGene:TraesCS3B01G330400	EnsemblPlants:TraesCS3B01G330400.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr3B:+:534516020..534516907

Molecular Weight (calculated)

31804.8 Da

IEP (calculated)

4.992

GRAVY (calculated)

-0.209

Length

295 amino acids

Sequence
(BLAST)

001: MDMARYVAFH QQWIAGQQAG LGELAEAAAN AAAGRATDAE LKTVVERCMR GYQEYAASRR AMARENGAAF VAPPWCTAFE NSVLWLGGCR PSLAIRLLYS
101: ISGEGLEEDI EEFVSGRGRG LAEEMGLIGI TATQLQQIND LHRCTLRDEG YLTERLASLQ ENIADRPLLP IVREHAVAAT ALVGQDRSVK RDDIPGRLAA
201: AESSGGLAAE VDAAMESYSA GLARLLEEAD ELRMSTARAL ATEILTPRQA VEMLMAAKQL HLAVRDWSRR KEEGAQNARL PRAAAATTAP SGSNP

Best Arabidopsis Sequence Match ( AT4G18690.1 )
(BLAST)

001: MATSSSSYGI EQLQKGCYYE WMSVQAKHIV DLKEALMSHR SKEDHKLEEL VGKIVNDFQK YTEKRSELSR RSCSSYFAPS WNSPLENGLL WMGGCRPSSF
101: IRVIYSLCGS QAETQLSQYL LKIDENVEVN HGGSMSDLNA SQLAKINDLH IKVIEKEDKI TKKSANLQEN VADMPIAIAA YATDLMNGDV VVEDALDKYE
201: EGMAVLMVEA DKLRFETLRK IVDVVTPVQA AEFLLAGKRL HISLHEWGRV REEQRFGCVR TDAAAATGGA GTEKSKRSSL LM

Arabidopsis Description

DOGL3Protein DOG1-like 3 [Source:UniProtKB/Swiss-Prot;Acc:Q58FV0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.