Factsheet for Bra017589.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1
extracellular 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, extracellular, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	extracellular
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY52216	Canola	cytosol	98.93	98.93
Bra025050.1-P	Field mustard	nucleus	88.57	88.57
AT5G45830.1	Thale cress	nucleus	76.79	66.56
Bra013338.1-P	Field mustard	cytosol	50.71	56.35
Bra012582.1-P	Field mustard	cytosol	42.14	47.58
Bra020997.1-P	Field mustard	nucleus	47.86	46.69
VIT_19s0014g01220.t01	Wine grape	nucleus	34.64	39.43
Solyc02g072570.1.1	Tomato	cytosol	34.64	38.8
Solyc03g006120.2.1	Tomato	cytosol, mitochondrion	26.79	37.69
PGSC0003DMT400073292	Potato	cytosol	33.21	37.2
PGSC0003DMT400073296	Potato	nucleus	32.14	35.86
PGSC0003DMT400088909	Potato	nucleus	31.07	35.66
Solyc02g073570.1.1	Tomato	nucleus	33.57	33.69
PGSC0003DMT400073133	Potato	nucleus	33.57	33.57
PGSC0003DMT400068759	Potato	cytosol	27.86	33.33
Zm00001d043390_P001	Maize	cytosol	32.5	30.64
OQU87585	Sorghum	cytosol	33.21	30.19
GSMUA_Achr4P08070_001	Banana	cytosol	23.93	29.52
TraesCS3A01G306200.1	Wheat	cytosol	31.07	29.39
TraesCS3B01G330400.1	Wheat	cytosol	30.71	29.15
TraesCS3D01G295800.1	Wheat	cytosol	30.36	29.11
Bra027297.1-P	Field mustard	nucleus	23.21	27.43
Bra013337.1-P	Field mustard	cytosol	17.5	24.14
Bra019973.1-P	Field mustard	cytosol, plastid	19.29	23.48
Bra031691.1-P	Field mustard	plastid	18.57	22.51

Protein Annotations

MapMan:15.5.4.5	EnsemblPlantsGene:Bra017589	EnsemblPlants:Bra017589.1	EnsemblPlants:Bra017589.1-P	ncoils:Coil	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0006139	GO:GO:0006351	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:IPR025422	UniProt:M4DM57
PFAM:PF14144	PFscan:PS51806	PANTHER:PTHR22952	PANTHER:PTHR22952:SF210	InterPro:TGA_domain	UniParc:UPI0002542549
SEG:seg	:	:	:	:	:

Description

AT5G45830 (E=4e-110) DOG1, GSQ5 | DOG1 (DELAY OF GERMINATION 1)

Coordinates

chrA09:+:16732234..16733887

Molecular Weight (calculated)

31067.6 Da

IEP (calculated)

4.972

GRAVY (calculated)

-0.486

Length

280 amino acids

Sequence
(BLAST)

001: MENKGKNIEQ AQASCYQQWM SIQSQRVPEL KQALAQRRTH EGTADAAADD NKLRELTQNI IGDFKNYAGK RADLSHRCSS SYYAPSWNTP LENALIWMGG
101: CRPSSFFRLV YALCGSQTEI RVTQFLRNID GYDYSGSGGA SLSDLTAEQL AKINVLHVKI IDEEEKMTKK VSSLQEDAAD IPISTVAYAE EHVGEPNAMV
201: DQALDKQEEA MATLLAEADN LRVDTLAKII EILTPVQAGD FLMAGKKLHL SMHHWGALRD RRRCECIIDA GNDGGGEDEK

Best Arabidopsis Sequence Match ( AT5G45830.2 )
(BLAST)

001: MGSSSKNIEQ AQDSYLEWMS LQSQRIPELK QLLAQRRSHG DEDNDNKLRK LTGKIIGDFK NYAAKRADLA HRCSSNYYAP TWNSPLENAL IWMGGCRPSS
101: FFRLVYALCG SQTEIRVTQF LRNIDGYESS GGGGGASLSD LSAEQLAKIN VLHVKIIDEE EKMTKKVSSL QEDAADIPIA TVAYEMENVG EPNVVVDQAL
201: DKQEEAMARL LVEADNLRVD TLAKILGILS PVQGADFLLA GKKLHLSMHE WGTMRDRRRR DCMVDTEGNA GGEEGK

Arabidopsis Description

DOG1delay of germination 1 [Source:TAIR;Acc:AT5G45830]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.