Factsheet for Bra012582.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY70293	Canola	cytosol	100.0	100.0
AT4G18690.1	Thale cress	cytosol	73.79	64.89
Bra020997.1-P	Field mustard	nucleus	75.0	64.81
AT4G18680.1	Thale cress	cytosol	61.29	64.68
Bra013338.1-P	Field mustard	cytosol	47.98	47.22
Bra025050.1-P	Field mustard	nucleus	47.98	42.5
Bra017589.1-P	Field mustard	cytosol	47.58	42.14
Solyc03g006120.2.1	Tomato	cytosol, mitochondrion	32.66	40.7
PGSC0003DMT400088909	Potato	nucleus	35.48	36.07
PGSC0003DMT400068759	Potato	cytosol	33.06	35.04
VIT_19s0014g01220.t01	Wine grape	nucleus	33.87	34.15
Solyc02g072570.1.1	Tomato	cytosol	33.06	32.8
PGSC0003DMT400073292	Potato	cytosol	31.85	31.6
PGSC0003DMT400073296	Potato	nucleus	31.45	31.08
Solyc02g073570.1.1	Tomato	nucleus	32.66	29.03
PGSC0003DMT400073133	Potato	nucleus	32.66	28.93
Zm00001d043390_P001	Maize	cytosol	32.26	26.94
OQU87585	Sorghum	cytosol	31.85	25.65
GSMUA_Achr4P08070_001	Banana	cytosol	22.98	25.11
TraesCS3A01G306200.1	Wheat	cytosol	28.63	23.99
TraesCS3B01G330400.1	Wheat	cytosol	28.23	23.73
Bra013337.1-P	Field mustard	cytosol	19.35	23.65
TraesCS3D01G295800.1	Wheat	cytosol	27.82	23.63
Bra019973.1-P	Field mustard	cytosol, plastid	21.77	23.48
Bra031691.1-P	Field mustard	plastid	21.77	23.38
Bra027297.1-P	Field mustard	nucleus	21.77	22.78

Protein Annotations

MapMan:15.5.4.5	EnsemblPlantsGene:Bra012582	EnsemblPlants:Bra012582.1	EnsemblPlants:Bra012582.1-P	ncoils:Coil	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0006139	GO:GO:0006351	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:IPR025422	UniProt:M4D7X2
PFAM:PF14144	PFscan:PS51806	PANTHER:PTHR22952	PANTHER:PTHR22952:SF210	InterPro:TGA_domain	UniParc:UPI0002540A95

Description

AT4G18690 (E=8e-100) | unknown protein

Coordinates

chrA03:+:23423511..23424257

Molecular Weight (calculated)

27349.3 Da

IEP (calculated)

5.215

GRAVY (calculated)

-0.352

Length

248 amino acids

Sequence
(BLAST)

001: MSQRSNAYDH HKLEELVGRI VNDFQKYADK RSELADRSCS CYFAPSWNSS LENGLLWMGG CRPSSFMRII YALCGSHAET QLSQYLLKMD GEVVDGHDGD
101: SSMSELNATQ LAKINDLHVE VIAKEDKLSK LSANMQEDVA DMPIAVTAFS SDSVEADVAV EDALDKHEEG MAVLIADADK LRLETLKKIV EVLTPVQAAE
201: FLLSGKRLHV SLHEWGRVRE ERRFGCARAE DAAPARGGAG KSKRSATC

Best Arabidopsis Sequence Match ( AT4G18690.1 )
(BLAST)

001: MATSSSSYGI EQLQKGCYYE WMSVQAKHIV DLKEALMSHR SKEDHKLEEL VGKIVNDFQK YTEKRSELSR RSCSSYFAPS WNSPLENGLL WMGGCRPSSF
101: IRVIYSLCGS QAETQLSQYL LKIDENVEVN HGGSMSDLNA SQLAKINDLH IKVIEKEDKI TKKSANLQEN VADMPIAIAA YATDLMNGDV VVEDALDKYE
201: EGMAVLMVEA DKLRFETLRK IVDVVTPVQA AEFLLAGKRL HISLHEWGRV REEQRFGCVR TDAAAATGGA GTEKSKRSSL LM

Arabidopsis Description

DOGL3Protein DOG1-like 3 [Source:UniProtKB/Swiss-Prot;Acc:Q58FV0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.