Factsheet for PGSC0003DMT400073296

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400073292	Potato	cytosol	57.37	57.6
PGSC0003DMT400088909	Potato	nucleus	50.6	52.05
PGSC0003DMT400068759	Potato	cytosol	47.81	51.28
PGSC0003DMT400073133	Potato	nucleus	45.02	40.36
CDX78883	Canola	cytosol, nucleus, plastid	19.92	40.0
VIT_19s0014g01220.t01	Wine grape	nucleus	35.46	36.18
CDX99444	Canola	cytosol, nucleus, plastid	18.73	35.88
Bra013338.1-P	Field mustard	cytosol	34.26	34.13
AT4G18680.1	Thale cress	cytosol	31.87	34.04
CDX76507	Canola	nucleus	31.87	33.47
Bra020997.1-P	Field mustard	nucleus	37.45	32.75
CDY52216	Canola	cytosol	36.26	32.5
Bra017589.1-P	Field mustard	cytosol	35.86	32.14
CDY61468	Canola	cytosol	35.86	32.14
CDY23102	Canola	nucleus	35.86	32.14
Bra025050.1-P	Field mustard	nucleus	35.86	32.14
CDY58051	Canola	nucleus	35.46	31.79
CDY66844	Canola	cytosol	35.86	31.58
CDY70293	Canola	cytosol	31.08	31.45
Bra012582.1-P	Field mustard	cytosol	31.08	31.45
AT4G18690.1	Thale cress	cytosol	35.06	31.21
PGSC0003DMT400039657	Potato	cytosol	27.09	30.36
Zm00001d043390_P001	Maize	cytosol	35.86	30.3
AT5G45830.1	Thale cress	nucleus	37.45	29.1
GSMUA_Achr4P08070_001	Banana	cytosol	26.29	29.07
OQU87585	Sorghum	cytosol	35.46	28.9
TraesCS3D01G295800.1	Wheat	cytosol	33.07	28.42
TraesCS3A01G306200.1	Wheat	cytosol	33.47	28.38
CDY34053	Canola	cytosol	36.65	28.22
TraesCS3B01G330400.1	Wheat	cytosol	33.07	28.14
PGSC0003DMT400018207	Potato	nucleus	19.12	27.75
PGSC0003DMT400011369	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	26.29	27.5
PGSC0003DMT400059950	Potato	cytosol	30.68	27.11
PGSC0003DMT400012745	Potato	cytosol	25.1	26.69
PGSC0003DMT400026417	Potato	cytosol	22.31	25.23
PGSC0003DMT400028833	Potato	cytosol	23.11	23.39
PGSC0003DMT400028832	Potato	cytosol	9.56	21.62

Protein Annotations

MapMan:15.5.4.5	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0006139
GO:GO:0006351	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565
InterPro:IPR025422	UniProt:M1CRR7	PFAM:PF14144	EnsemblPlantsGene:PGSC0003DMG400028482	PGSC:PGSC0003DMG400028482	EnsemblPlants:PGSC0003DMT400073296
PFscan:PS51806	PANTHER:PTHR22952	PANTHER:PTHR22952:SF210	InterPro:TGA_domain	UniParc:UPI0002949644	SEG:seg

Description

DOG1 alpha splice variant [Source:PGSC_GENE;Acc:PGSC0003DMG400028482]

Coordinates

chr2:-:31933629..31934384

Molecular Weight (calculated)

28340.7 Da

IEP (calculated)

5.451

GRAVY (calculated)

-0.548

Length

251 amino acids

Sequence
(BLAST)

001: MASTSTPSIS DSPTEQECVY ETWMNLQRKE TIELEQAALE AKNGLKNENQ LTQLIEKTVQ NFQDYASNRS RLARIDVSPL FAPTSCTPLE NSVRWIAGCR
101: PSSLIRFAYV LCGIDIESHL TEFLQGKKLG DLGELTNKQM NMIDALQAKT IREENNLSSR LASLQEDIVD QPFAGKSKND CENADEALDE HSRHMAGVLK
201: DADELRMNTL KEIVLNILKP LQAVEYLAAA KKLKHCFKIW GQKRDQPRTN N

Best Arabidopsis Sequence Match ( AT4G18690.1 )
(BLAST)

001: MATSSSSYGI EQLQKGCYYE WMSVQAKHIV DLKEALMSHR SKEDHKLEEL VGKIVNDFQK YTEKRSELSR RSCSSYFAPS WNSPLENGLL WMGGCRPSSF
101: IRVIYSLCGS QAETQLSQYL LKIDENVEVN HGGSMSDLNA SQLAKINDLH IKVIEKEDKI TKKSANLQEN VADMPIAIAA YATDLMNGDV VVEDALDKYE
201: EGMAVLMVEA DKLRFETLRK IVDVVTPVQA AEFLLAGKRL HISLHEWGRV REEQRFGCVR TDAAAATGGA GTEKSKRSSL LM

Arabidopsis Description

DOGL3Protein DOG1-like 3 [Source:UniProtKB/Swiss-Prot;Acc:Q58FV0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.