Factsheet for Bra013338.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX78883	Canola	cytosol, nucleus, plastid	36.51	73.6
CDX99444	Canola	cytosol, nucleus, plastid	34.52	66.41
Bra025050.1-P	Field mustard	nucleus	56.75	51.07
Bra017589.1-P	Field mustard	cytosol	56.35	50.71
Bra012582.1-P	Field mustard	cytosol	47.22	47.98
Bra020997.1-P	Field mustard	nucleus	50.4	44.25
VIT_19s0014g01220.t01	Wine grape	nucleus	38.49	39.43
Solyc03g006120.2.1	Tomato	cytosol, mitochondrion	29.76	37.69
PGSC0003DMT400073296	Potato	nucleus	34.13	34.26
Solyc02g072570.1.1	Tomato	cytosol	33.73	34.0
PGSC0003DMT400088909	Potato	nucleus	32.54	33.61
PGSC0003DMT400073292	Potato	cytosol	32.94	33.2
PGSC0003DMT400068759	Potato	cytosol	30.16	32.48
Zm00001d043390_P001	Maize	cytosol	38.1	32.32
OQU87585	Sorghum	cytosol	39.29	32.14
Solyc02g073570.1.1	Tomato	nucleus	34.92	31.54
PGSC0003DMT400073133	Potato	nucleus	34.92	31.43
GSMUA_Achr4P08070_001	Banana	cytosol	26.59	29.52
TraesCS3D01G295800.1	Wheat	cytosol	33.73	29.11
TraesCS3A01G306200.1	Wheat	cytosol	33.73	28.72
TraesCS3B01G330400.1	Wheat	cytosol	32.94	28.14
Bra027297.1-P	Field mustard	nucleus	25.0	26.58
Bra019973.1-P	Field mustard	cytosol, plastid	23.02	25.22
Bra013337.1-P	Field mustard	cytosol	20.24	25.12
Bra031691.1-P	Field mustard	plastid	22.22	24.24

Protein Annotations

MapMan:15.5.4.5	EnsemblPlantsGene:Bra013338	EnsemblPlants:Bra013338.1	EnsemblPlants:Bra013338.1-P	ncoils:Coil	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0006139	GO:GO:0006351	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:IPR025422	UniProt:M4DA28
PFAM:PF14144	PFscan:PS51806	PANTHER:PTHR22952	PANTHER:PTHR22952:SF210	InterPro:TGA_domain	UniParc:UPI0002546269

Description

AT5G45830 (E=3e-072) DOG1, GSQ5 | DOG1 (DELAY OF GERMINATION 1)

Coordinates

chrA01:+:5073136..5074877

Molecular Weight (calculated)

28261.6 Da

IEP (calculated)

4.984

GRAVY (calculated)

-0.431

Length

252 amino acids

Sequence
(BLAST)

001: MTDLKRALAN GEKNDGALRE LIQSVIEDFK DYARKRSEHS RRYSSNYFAP TWNTCLENAL LWMGGCRPSS FIRLVYAMCG SQTELRLTNF FRDNIGGLSM
101: ALGETPGRVD GAGESMSDLT AEQLFKINEL HMKTVQEENM LTKQSATLQE DTADMPIAVA AFHKERIGEA DVEVERALDK YEDEIARMLA EADKLRLTTL
201: TKIVEILTAV QAADFLLAGK KLHLSMHEWG RQRERRLLEA CGDDSGGEFS GG

Best Arabidopsis Sequence Match ( AT5G45830.5 )
(BLAST)

001: MKTKTHKTQT RKPKEIKPII KILLIISEKK KKMGSSSKNI EQAQDSYLEW MSLQSQRIPE LKQLLAQRRS HGDEDNDNKL RKLTGKIIGD FKNYAAKRAD
101: LAHRCSSNYY APTWNSPLEN ALIWMGGCRP SSFFRLVYAL CGSQTEIRVT QFLRNIDGYE SSGGGGGASL SDLSAEQLAK INVLHVKIID EEEKMTKKVS
201: SLQEDAADIP IATVAYEMEN VGEPNVVVDQ ALDKQEEAMA RLLVEADNLR VDTLAKILGI LSPVQGADFL LAGKKLHLSM HEWGTMRDRR RRDCMVDTEG
301: NAGGEEGK

Arabidopsis Description

DOG1delay of germination 1 [Source:TAIR;Acc:AT5G45830]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.