Factsheet for Bra020997.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX76507	Canola	nucleus	79.09	94.98
Bra012582.1-P	Field mustard	cytosol	64.81	75.0
AT4G18690.1	Thale cress	cytosol	69.34	70.57
AT4G18680.1	Thale cress	cytosol	54.7	66.81
Bra013338.1-P	Field mustard	cytosol	44.25	50.4
Bra025050.1-P	Field mustard	nucleus	47.04	48.21
Bra017589.1-P	Field mustard	cytosol	46.69	47.86
Solyc03g006120.2.1	Tomato	cytosol, mitochondrion	27.87	40.2
PGSC0003DMT400088909	Potato	nucleus	32.06	37.7
PGSC0003DMT400073296	Potato	nucleus	32.75	37.45
VIT_19s0014g01220.t01	Wine grape	nucleus	31.71	36.99
Solyc02g072570.1.1	Tomato	cytosol	31.36	36.0
PGSC0003DMT400068759	Potato	cytosol	29.27	35.9
PGSC0003DMT400073292	Potato	cytosol	30.66	35.2
PGSC0003DMT400073133	Potato	nucleus	32.06	32.86
Solyc02g073570.1.1	Tomato	nucleus	31.71	32.62
GSMUA_Achr4P08070_001	Banana	cytosol	24.74	31.28
Zm00001d043390_P001	Maize	cytosol	31.01	29.97
OQU87585	Sorghum	cytosol	31.36	29.22
TraesCS3D01G295800.1	Wheat	cytosol	26.13	25.68
TraesCS3A01G306200.1	Wheat	cytosol	26.48	25.68
Bra019973.1-P	Field mustard	cytosol, plastid	20.21	25.22
TraesCS3B01G330400.1	Wheat	cytosol	25.78	25.08
Bra031691.1-P	Field mustard	plastid	19.51	24.24
Bra013337.1-P	Field mustard	cytosol	17.07	24.14
Bra027297.1-P	Field mustard	nucleus	19.86	24.05

Protein Annotations

MapMan:15.5.4.5	EnsemblPlantsGene:Bra020997	EnsemblPlants:Bra020997.1	EnsemblPlants:Bra020997.1-P	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	GO:GO:0006139	GO:GO:0006351	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:IPR025422	UniProt:M4DWV1	PFAM:PF14144
PFscan:PS51806	PANTHER:PTHR22952	PANTHER:PTHR22952:SF210	InterPro:TGA_domain	UniParc:UPI000254729B	SEG:seg

Description

AT4G18690 (E=1e-104) | unknown protein

Coordinates

chrA08:+:10670485..10671348

Molecular Weight (calculated)

32743.6 Da

IEP (calculated)

5.029

GRAVY (calculated)

-0.501

Length

287 amino acids

Sequence
(BLAST)

001: MASSSSSSYG IEQLQKECYY EWMSLQAKHI VDLKEALIRQ RSNAYNHHKL EELVGKIVND FQSYAKRRSE LTDKSCSSYF APSWNSSLEN GLLWMGGCRP
101: SSFVRVIYAL CGSCAEAHLS RYLLQIDENI DDGHDGDSSM SDLTATQLEK INDLHVKVIR EEDKLTKKYA NFQEDVADMP IAVTAFWRDS VEADVAVEDA
201: LDKHEECMGV LMADADKVRV ETLRRIVEVL TPVQAAEFLL SGKRLHMSLH EWGRAREERR YGCVHVGMQQ QGEPEPESQR DRTLIDM

Best Arabidopsis Sequence Match ( AT4G18690.1 )
(BLAST)

001: MATSSSSYGI EQLQKGCYYE WMSVQAKHIV DLKEALMSHR SKEDHKLEEL VGKIVNDFQK YTEKRSELSR RSCSSYFAPS WNSPLENGLL WMGGCRPSSF
101: IRVIYSLCGS QAETQLSQYL LKIDENVEVN HGGSMSDLNA SQLAKINDLH IKVIEKEDKI TKKSANLQEN VADMPIAIAA YATDLMNGDV VVEDALDKYE
201: EGMAVLMVEA DKLRFETLRK IVDVVTPVQA AEFLLAGKRL HISLHEWGRV REEQRFGCVR TDAAAATGGA GTEKSKRSSL LM

Arabidopsis Description

DOGL3Protein DOG1-like 3 [Source:UniProtKB/Swiss-Prot;Acc:Q58FV0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.