Factsheet for Bra025050.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY58051	Canola	nucleus	97.86	97.86
Bra017589.1-P	Field mustard	cytosol	88.57	88.57
AT5G45830.1	Thale cress	nucleus	76.07	65.94
Bra013338.1-P	Field mustard	cytosol	51.07	56.75
Bra012582.1-P	Field mustard	cytosol	42.5	47.98
Bra020997.1-P	Field mustard	nucleus	48.21	47.04
VIT_19s0014g01220.t01	Wine grape	nucleus	33.93	38.62
Solyc02g072570.1.1	Tomato	cytosol	33.93	38.0
Solyc03g006120.2.1	Tomato	cytosol, mitochondrion	26.43	37.19
PGSC0003DMT400073292	Potato	cytosol	32.86	36.8
PGSC0003DMT400073296	Potato	nucleus	32.14	35.86
PGSC0003DMT400088909	Potato	nucleus	30.71	35.25
Solyc02g073570.1.1	Tomato	nucleus	34.29	34.41
PGSC0003DMT400073133	Potato	nucleus	33.57	33.57
PGSC0003DMT400068759	Potato	cytosol	27.86	33.33
OQU87585	Sorghum	cytosol	32.86	29.87
Zm00001d043390_P001	Maize	cytosol	31.43	29.63
GSMUA_Achr4P08070_001	Banana	cytosol	23.93	29.52
Bra027297.1-P	Field mustard	nucleus	23.93	28.27
TraesCS3D01G295800.1	Wheat	cytosol	28.21	27.05
TraesCS3A01G306200.1	Wheat	cytosol	28.57	27.03
TraesCS3B01G330400.1	Wheat	cytosol	28.21	26.78
Bra013337.1-P	Field mustard	cytosol	18.21	25.12
Bra019973.1-P	Field mustard	cytosol, plastid	18.57	22.61
Bra031691.1-P	Field mustard	plastid	17.86	21.64

Protein Annotations

MapMan:15.5.4.5	ProteinID:ACV41802	ProteinID:ACV41802.1	EnsemblPlantsGene:Bra025050	EnsemblPlants:Bra025050.1	EnsemblPlants:Bra025050.1-P
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0006139	GO:GO:0006351
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	EMBL:GQ411194
InterPro:IPR025422	UniProt:M4E8E4	PFAM:PF14144	PFscan:PS51806	PANTHER:PTHR22952	PANTHER:PTHR22952:SF210
InterPro:TGA_domain	UniParc:UPI000253FBEE	SEG:seg	:	:	:

Description

AT5G45830 (E=2e-107) DOG1, GSQ5 | DOG1 (DELAY OF GERMINATION 1)

Coordinates

chrA06:+:24899215..24900358

Molecular Weight (calculated)

31050.9 Da

IEP (calculated)

5.703

GRAVY (calculated)

-0.429

Length

280 amino acids

Sequence
(BLAST)

001: MEDKGKNIEQ AQQSCYLGWM SLQSQRVLDL KQALAQRRSH EGTADAAADD KKLRELTQKI IGDFKDYARK RADLSHRCSS SYYAPSWNTP LENALIWMGG
101: CRPSSFFRLV YALCGSQTEI RVTQFLRNID GYDASGSGGA SLSDLTGEQL AKINVLHLKI IDEEEKMTKK VSSLQEDAAD IPISTVAYAE EHVGEPNLAV
201: DQALDKQEEA MATLLAEADN LRVYTLSKII EVLAPMQAAD FLLAGKKLHL SMHAWGALRD RRRRECIIDA ADDAGGKEGK

Best Arabidopsis Sequence Match ( AT5G45830.2 )
(BLAST)

001: MGSSSKNIEQ AQDSYLEWMS LQSQRIPELK QLLAQRRSHG DEDNDNKLRK LTGKIIGDFK NYAAKRADLA HRCSSNYYAP TWNSPLENAL IWMGGCRPSS
101: FFRLVYALCG SQTEIRVTQF LRNIDGYESS GGGGGASLSD LSAEQLAKIN VLHVKIIDEE EKMTKKVSSL QEDAADIPIA TVAYEMENVG EPNVVVDQAL
201: DKQEEAMARL LVEADNLRVD TLAKILGILS PVQGADFLLA GKKLHLSMHE WGTMRDRRRR DCMVDTEGNA GGEEGK

Arabidopsis Description

DOG1delay of germination 1 [Source:TAIR;Acc:AT5G45830]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.