Factsheet for PGSC0003DMT400073133

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g073570.1.1	Tomato	nucleus	93.57	93.91
PGSC0003DMT400073292	Potato	cytosol	41.07	46.0
VIT_19s0014g01220.t01	Wine grape	nucleus	39.64	45.12
PGSC0003DMT400073296	Potato	nucleus	40.36	45.02
PGSC0003DMT400088909	Potato	nucleus	36.79	42.21
PGSC0003DMT400068759	Potato	cytosol	34.64	41.45
CDX78883	Canola	cytosol, nucleus, plastid	16.07	36.0
Bra013338.1-P	Field mustard	cytosol	31.43	34.92
CDY52216	Canola	cytosol	34.29	34.29
AT4G18680.1	Thale cress	cytosol	28.57	34.04
CDY23102	Canola	nucleus	33.93	33.93
Bra017589.1-P	Field mustard	cytosol	33.57	33.57
Bra025050.1-P	Field mustard	nucleus	33.57	33.57
CDY58051	Canola	nucleus	32.86	32.86
CDY61468	Canola	cytosol	32.86	32.86
CDX99444	Canola	cytosol, nucleus, plastid	15.36	32.82
Bra012582.1-P	Field mustard	cytosol	28.93	32.66
CDY70293	Canola	cytosol	28.93	32.66
CDX76507	Canola	nucleus	27.86	32.64
AT4G18690.1	Thale cress	cytosol	32.86	32.62
GSMUA_Achr4P08070_001	Banana	cytosol	26.43	32.6
TraesCS3B01G330400.1	Wheat	cytosol	33.93	32.2
TraesCS3D01G295800.1	Wheat	cytosol	33.57	32.19
PGSC0003DMT400039657	Potato	cytosol	25.71	32.14
TraesCS3A01G306200.1	Wheat	cytosol	33.93	32.09
Bra020997.1-P	Field mustard	nucleus	32.86	32.06
Zm00001d043390_P001	Maize	cytosol	33.57	31.65
CDY66844	Canola	cytosol	32.14	31.58
PGSC0003DMT400059950	Potato	cytosol	31.07	30.63
PGSC0003DMT400011369	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	25.36	29.58
OQU87585	Sorghum	cytosol	32.5	29.55
AT5G45830.1	Thale cress	nucleus	33.93	29.41
PGSC0003DMT400028832	Potato	cytosol	11.43	28.83
CDY34053	Canola	cytosol	33.21	28.53
PGSC0003DMT400026417	Potato	cytosol	22.14	27.93
PGSC0003DMT400018207	Potato	nucleus	17.14	27.75
PGSC0003DMT400028833	Potato	cytosol	23.57	26.61
PGSC0003DMT400012745	Potato	cytosol	21.79	25.85

Protein Annotations

EntrezGene:102605559	MapMan:15.5.4.5	ncoils:Coil	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0006139	GO:GO:0006351	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0043565	InterPro:IPR025422	UniProt:M1CRK6	PFAM:PF14144	EnsemblPlantsGene:PGSC0003DMG400028441
PGSC:PGSC0003DMG400028441	EnsemblPlants:PGSC0003DMT400073133	PFscan:PS51806	PANTHER:PTHR22952	PANTHER:PTHR22952:SF210	InterPro:TGA_domain
UniParc:UPI00029501B0	RefSeq:XP_006358130.1	SEG:seg	:	:	:

Description

Delay of germination 1 [Source:PGSC_GENE;Acc:PGSC0003DMG400028441]

Coordinates

chr2:+:31922229..31923898

Molecular Weight (calculated)

31760.3 Da

IEP (calculated)

5.201

GRAVY (calculated)

-0.509

Length

280 amino acids

Sequence
(BLAST)

001: MTSLNNNVSD KEAQHSCFQE WMELQQQDLL ELLHNSDSSS SSSSTSNTSA SSDFNLKQLI EKSIKHFQEY MDTRRHLAGS DVTAYLAPTW CTTLESSMLW
101: ISGCRPSSYI RLLYAMSGKE FESHLSNYLQ GNRSGHLSGL LTVQLNSVDE LQRKTIRQED QLSNKLASLQ EEIADQPFTI IANEVGNLGE ICYEAEEALD
201: RHAKFLMNVV EEADKLRMET LKELVINILS PLQAVDFLIA SKKLHLCVNA WGKTRDHQHG RNRETTQERN TCPTLSCLEN

Best Arabidopsis Sequence Match ( AT4G18690.1 )
(BLAST)

001: MATSSSSYGI EQLQKGCYYE WMSVQAKHIV DLKEALMSHR SKEDHKLEEL VGKIVNDFQK YTEKRSELSR RSCSSYFAPS WNSPLENGLL WMGGCRPSSF
101: IRVIYSLCGS QAETQLSQYL LKIDENVEVN HGGSMSDLNA SQLAKINDLH IKVIEKEDKI TKKSANLQEN VADMPIAIAA YATDLMNGDV VVEDALDKYE
201: EGMAVLMVEA DKLRFETLRK IVDVVTPVQA AEFLLAGKRL HISLHEWGRV REEQRFGCVR TDAAAATGGA GTEKSKRSSL LM

Arabidopsis Description

DOGL3Protein DOG1-like 3 [Source:UniProtKB/Swiss-Prot;Acc:Q58FV0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.