Factsheet for PGSC0003DMT400068759

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 2
nucleus 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc03g006120.2.1	Tomato	cytosol, mitochondrion	77.35	90.95
PGSC0003DMT400088909	Potato	nucleus	93.16	89.34
PGSC0003DMT400073296	Potato	nucleus	51.28	47.81
PGSC0003DMT400073292	Potato	cytosol	48.29	45.2
PGSC0003DMT400073133	Potato	nucleus	41.45	34.64
AT4G18680.1	Thale cress	cytosol	34.62	34.47
Bra012582.1-P	Field mustard	cytosol	35.04	33.06
CDY70293	Canola	cytosol	35.04	33.06
VIT_19s0014g01220.t01	Wine grape	nucleus	33.33	31.71
CDX78883	Canola	cytosol, nucleus, plastid	16.24	30.4
Bra013338.1-P	Field mustard	cytosol	32.48	30.16
CDY66844	Canola	cytosol	36.32	29.82
AT4G18690.1	Thale cress	cytosol	35.9	29.79
CDX76507	Canola	nucleus	30.34	29.71
Bra020997.1-P	Field mustard	nucleus	35.9	29.27
PGSC0003DMT400059950	Potato	cytosol	34.62	28.52
CDX99444	Canola	cytosol, nucleus, plastid	15.81	28.24
CDY23102	Canola	nucleus	33.76	28.21
CDY52216	Canola	cytosol	33.33	27.86
Bra025050.1-P	Field mustard	nucleus	33.33	27.86
Bra017589.1-P	Field mustard	cytosol	33.33	27.86
Zm00001d043390_P001	Maize	cytosol	35.04	27.61
CDY58051	Canola	nucleus	32.91	27.5
GSMUA_Achr4P08070_001	Banana	cytosol	26.5	27.31
CDY61468	Canola	cytosol	32.05	26.79
TraesCS3A01G306200.1	Wheat	cytosol	33.76	26.69
CDY34053	Canola	cytosol	36.75	26.38
TraesCS3D01G295800.1	Wheat	cytosol	32.91	26.37
TraesCS3B01G330400.1	Wheat	cytosol	32.91	26.1
AT5G45830.1	Thale cress	nucleus	35.9	26.01
PGSC0003DMT400018207	Potato	nucleus	18.8	25.43
PGSC0003DMT400011369	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	26.07	25.42
OQU87585	Sorghum	cytosol	33.33	25.32
PGSC0003DMT400039657	Potato	cytosol	23.93	25.0
PGSC0003DMT400026417	Potato	cytosol	23.5	24.77
PGSC0003DMT400028833	Potato	cytosol	23.08	21.77
PGSC0003DMT400028832	Potato	cytosol	10.26	21.62
PGSC0003DMT400012745	Potato	cytosol	20.94	20.76

Protein Annotations

EntrezGene:107058964	MapMan:15.5.4.5	ncoils:Coil	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0006139	GO:GO:0006351	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0043565	InterPro:IPR025422	UniProt:M1CJG4	PFAM:PF14144	EnsemblPlantsGene:PGSC0003DMG400026742
PGSC:PGSC0003DMG400026742	EnsemblPlants:PGSC0003DMT400068759	PFscan:PS51806	PANTHER:PTHR22952	PANTHER:PTHR22952:SF210	InterPro:TGA_domain
UniParc:UPI000294DD55	RefSeq:XP_015160742.1	SEG:seg	:	:	:

Description

DOG1 alpha splice variant [Source:PGSC_GENE;Acc:PGSC0003DMG400026742]

Coordinates

chr3:-:1311553..1313493

Molecular Weight (calculated)

27163.6 Da

IEP (calculated)

7.410

GRAVY (calculated)

-0.620

Length

234 amino acids

Sequence
(BLAST)

001: MDEQSTRRTK RASKRHRLCS KNELNDDELN ELLRKMVNNF QEYANGCSRL ARVDVSPFFA PTWCTPLENS VLWIGGCRPS SFIRLIYALS EIENESHIAE
101: YLRGMKIGDF GQLFGKQITM IDKLQRQIIL EEKRFSSRLA SLQEDVVDQP FAMAARIYDT KRGENEIEPL NKHGEDMSNL LEEVDELRMK TLKEILGILT
201: PIQGVEYLAA AKRIRLCLQQ WGKKREQEHN SNNN

Best Arabidopsis Sequence Match ( AT4G18690.1 )
(BLAST)

001: MATSSSSYGI EQLQKGCYYE WMSVQAKHIV DLKEALMSHR SKEDHKLEEL VGKIVNDFQK YTEKRSELSR RSCSSYFAPS WNSPLENGLL WMGGCRPSSF
101: IRVIYSLCGS QAETQLSQYL LKIDENVEVN HGGSMSDLNA SQLAKINDLH IKVIEKEDKI TKKSANLQEN VADMPIAIAA YATDLMNGDV VVEDALDKYE
201: EGMAVLMVEA DKLRFETLRK IVDVVTPVQA AEFLLAGKRL HISLHEWGRV REEQRFGCVR TDAAAATGGA GTEKSKRSSL LM

Arabidopsis Description

DOGL3Protein DOG1-like 3 [Source:UniProtKB/Swiss-Prot;Acc:Q58FV0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.