Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX76507 | Canola | nucleus | 65.64 | 89.54 |
| CDY66844 | Canola | cytosol | 65.03 | 74.39 |
| CDY70293 | Canola | cytosol | 55.83 | 73.39 |
| AT4G18690.1 | Thale cress | cytosol | 60.12 | 69.5 |
| AT4G18680.1 | Thale cress | cytosol | 47.24 | 65.53 |
| CDX78883 | Canola | cytosol, nucleus, plastid | 19.33 | 50.4 |
| CDY58051 | Canola | nucleus | 42.02 | 48.93 |
| CDX99444 | Canola | cytosol, nucleus, plastid | 19.02 | 47.33 |
| CDY61468 | Canola | cytosol | 40.49 | 47.14 |
| CDY52216 | Canola | cytosol | 40.18 | 46.79 |
| CDY23102 | Canola | nucleus | 39.57 | 46.07 |
| Solyc03g006120.2.1 | Tomato | cytosol, mitochondrion | 25.15 | 41.21 |
| PGSC0003DMT400088909 | Potato | nucleus | 28.22 | 37.7 |
| VIT_19s0014g01220.t01 | Wine grape | nucleus | 27.91 | 36.99 |
| Solyc02g072570.1.1 | Tomato | cytosol | 28.22 | 36.8 |
| PGSC0003DMT400068759 | Potato | cytosol | 26.38 | 36.75 |
| PGSC0003DMT400073296 | Potato | nucleus | 28.22 | 36.65 |
| PGSC0003DMT400073292 | Potato | cytosol | 27.61 | 36.0 |
| PGSC0003DMT400073133 | Potato | nucleus | 28.53 | 33.21 |
| Solyc02g073570.1.1 | Tomato | nucleus | 28.22 | 32.97 |
| GSMUA_Achr4P08070_001 | Banana | cytosol | 21.78 | 31.28 |
| Zm00001d043390_P001 | Maize | cytosol | 26.69 | 29.29 |
| OQU87585 | Sorghum | cytosol | 26.69 | 28.25 |
| TraesCS3D01G295800.1 | Wheat | cytosol | 23.01 | 25.68 |
| TraesCS3A01G306200.1 | Wheat | cytosol | 23.31 | 25.68 |
| TraesCS3B01G330400.1 | Wheat | cytosol | 22.7 | 25.08 |
| CDX97614 | Canola | nucleus | 18.1 | 24.89 |
| CDX93460 | Canola | cytosol, plastid | 17.48 | 24.78 |
| CDY70896 | Canola | nucleus | 17.79 | 24.47 |
| CDX98510 | Canola | nucleus | 17.79 | 24.47 |
| CDX94928 | Canola | plastid | 16.87 | 23.91 |
| CDY22613 | Canola | cytosol, plastid | 16.56 | 23.28 |
| CDX78882 | Canola | cytosol | 16.87 | 23.01 |
| CDX99446 | Canola | cytosol | 16.87 | 23.01 |
Protein Annotations
| MapMan:15.5.4.5 | GO:A0A078HB78 | UniProt:A0A078HB78 | EnsemblPlants:CDY34053 | ProteinID:CDY34053 | ProteinID:CDY34053.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | EnsemblPlantsGene:GSBRNA2T00055933001 |
| InterPro:IPR025422 | PFAM:PF14144 | PFscan:PS51806 | PANTHER:PTHR22952 | PANTHER:PTHR22952:SF210 | InterPro:TGA_domain |
| UniParc:UPI0004EDCDAF | : | : | : | : | : |
Description
BnaC03g62790DBnaC03g62790D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HB78]
Coordinates
chrLK032327:-:57349..66775
Molecular Weight (calculated)
37240.3 Da
IEP (calculated)
6.289
GRAVY (calculated)
-0.465
Length
326 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSSSSSYG IEQLQKECYY EWMSLQAKHI VDLKEALMRQ RSNAYNHHKL FFLLTEFPGP SELVGKIVND FQSYAKGRSE LTDKSCSSYF APSWNSSLEN
101: GLLWMGGCLK SSHTRTDVKK KWVGSFQCRP ASFVRVIYAL CGSCAEAHLS RYLLQMDENI DDRHDGDSSM SDLTATQLEK INDLHVKVIR EEDEITKKCA
201: NLQEDVADMP IAVTAFWRDS VEADVAVENA LDKHEECMGV LMAEADKVRL ETLRRIVEVL TPVQAAEFLL SRKRLHMSLH EWGRAREERR YGCAHVRVQQ
301: QGEPEPGSQR DRTLLICECE FCKVNK
101: GLLWMGGCLK SSHTRTDVKK KWVGSFQCRP ASFVRVIYAL CGSCAEAHLS RYLLQMDENI DDRHDGDSSM SDLTATQLEK INDLHVKVIR EEDEITKKCA
201: NLQEDVADMP IAVTAFWRDS VEADVAVENA LDKHEECMGV LMAEADKVRL ETLRRIVEVL TPVQAAEFLL SRKRLHMSLH EWGRAREERR YGCAHVRVQQ
301: QGEPEPGSQR DRTLLICECE FCKVNK
001: MATSSSSYGI EQLQKGCYYE WMSVQAKHIV DLKEALMSHR SKEDHKLEEL VGKIVNDFQK YTEKRSELSR RSCSSYFAPS WNSPLENGLL WMGGCRPSSF
101: IRVIYSLCGS QAETQLSQYL LKIDENVEVN HGGSMSDLNA SQLAKINDLH IKVIEKEDKI TKKSANLQEN VADMPIAIAA YATDLMNGDV VVEDALDKYE
201: EGMAVLMVEA DKLRFETLRK IVDVVTPVQA AEFLLAGKRL HISLHEWGRV REEQRFGCVR TDAAAATGGA GTEKSKRSSL LM
101: IRVIYSLCGS QAETQLSQYL LKIDENVEVN HGGSMSDLNA SQLAKINDLH IKVIEKEDKI TKKSANLQEN VADMPIAIAA YATDLMNGDV VVEDALDKYE
201: EGMAVLMVEA DKLRFETLRK IVDVVTPVQA AEFLLAGKRL HISLHEWGRV REEQRFGCVR TDAAAATGGA GTEKSKRSSL LM
Arabidopsis Description
DOGL3Protein DOG1-like 3 [Source:UniProtKB/Swiss-Prot;Acc:Q58FV0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.