Factsheet for Solyc02g072570.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400073292	Potato	cytosol	90.4	90.4
Solyc03g006120.2.1	Tomato	cytosol, mitochondrion	42.0	52.76
Solyc02g073570.1.1	Tomato	nucleus	46.0	41.22
VIT_19s0014g01220.t01	Wine grape	nucleus	37.6	38.21
CDX78883	Canola	cytosol, nucleus, plastid	18.0	36.0
CDX99444	Canola	cytosol, nucleus, plastid	18.8	35.88
CDY52216	Canola	cytosol	39.2	35.0
CDY23102	Canola	nucleus	38.8	34.64
Bra017589.1-P	Field mustard	cytosol	38.8	34.64
AT4G18680.1	Thale cress	cytosol	32.4	34.47
Bra025050.1-P	Field mustard	nucleus	38.0	33.93
CDY61468	Canola	cytosol	38.0	33.93
Bra013338.1-P	Field mustard	cytosol	34.0	33.73
AT4G18690.1	Thale cress	cytosol	38.0	33.69
CDY58051	Canola	nucleus	37.6	33.57
CDX76507	Canola	nucleus	32.0	33.47
CDY70293	Canola	cytosol	32.8	33.06
Bra012582.1-P	Field mustard	cytosol	32.8	33.06
Solyc02g076640.1.1	Tomato	cytosol	11.2	32.18
CDY66844	Canola	cytosol	36.0	31.58
Bra020997.1-P	Field mustard	nucleus	36.0	31.36
GSMUA_Achr4P08070_001	Banana	cytosol	28.4	31.28
AT5G45830.1	Thale cress	nucleus	40.0	30.96
Zm00001d043390_P001	Maize	cytosol	34.4	28.96
Solyc09g005610.2.1	Tomato	cytosol	27.6	28.75
Solyc12g014300.1.1	Tomato	cytosol	18.4	28.4
CDY34053	Canola	cytosol	36.8	28.22
TraesCS3D01G295800.1	Wheat	cytosol	32.8	28.08
TraesCS3A01G306200.1	Wheat	cytosol	33.2	28.04
TraesCS3B01G330400.1	Wheat	cytosol	32.8	27.8
Solyc07g062380.1.1	Tomato	nucleus	24.8	27.43
OQU87585	Sorghum	cytosol	33.6	27.27
Solyc05g056410.1.1	Tomato	cytosol	29.6	27.11
Solyc02g073580.1.1	Tomato	cytosol	22.0	25.11
Solyc04g076970.2.1	Tomato	nucleus	24.0	24.69
Solyc10g085210.1.1	Tomato	cytosol	22.8	23.17

Protein Annotations

MapMan:15.5.4.5	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0006139
GO:GO:0006351	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565
InterPro:IPR025422	UniProt:K4B8N1	PFAM:PF14144	PFscan:PS51806	PANTHER:PTHR22952	PANTHER:PTHR22952:SF210
EnsemblPlantsGene:Solyc02g072570.1	EnsemblPlants:Solyc02g072570.1.1	InterPro:TGA_domain	UniParc:UPI0002767767	:	:

Description

No Description!

Coordinates

chr2:-:41735110..41735862

Molecular Weight (calculated)

28631.0 Da

IEP (calculated)

4.810

GRAVY (calculated)

-0.687

Length

250 amino acids

Sequence
(BLAST)

001: MATDSKKTDR EEQEYAKCVW MSLQHEELTE LEDAAAQIQD GEKDEGKLTQ LAEKIIQHFQ EHSDNRLRLA RKDVSPFFAP VTCSPLENSV LWIAGCRPSS
101: FIRLIYALCG FEPDVQGTDP CLEGIVTEDL RELSEKQLRM INELQGKTIR EERRISTKFA SLQEDTVDQP LAGKMKKEGH GCEKADEALD EHSGHMADVI
201: EEADRLRMKT LKEIVNILEP VQAVEYLAAA KKMRFCVQQW GEKRDQQHKE

Best Arabidopsis Sequence Match ( AT4G18690.1 )
(BLAST)

001: MATSSSSYGI EQLQKGCYYE WMSVQAKHIV DLKEALMSHR SKEDHKLEEL VGKIVNDFQK YTEKRSELSR RSCSSYFAPS WNSPLENGLL WMGGCRPSSF
101: IRVIYSLCGS QAETQLSQYL LKIDENVEVN HGGSMSDLNA SQLAKINDLH IKVIEKEDKI TKKSANLQEN VADMPIAIAA YATDLMNGDV VVEDALDKYE
201: EGMAVLMVEA DKLRFETLRK IVDVVTPVQA AEFLLAGKRL HISLHEWGRV REEQRFGCVR TDAAAATGGA GTEKSKRSSL LM

Arabidopsis Description

DOGL3Protein DOG1-like 3 [Source:UniProtKB/Swiss-Prot;Acc:Q58FV0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.