Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400011369 | Potato | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 90.0 | 90.0 |
| Solyc10g085210.1.1 | Tomato | cytosol | 60.0 | 58.54 |
| KRH49400 | Soybean | cytosol | 40.83 | 42.06 |
| KRH00273 | Soybean | cytosol | 40.42 | 41.81 |
| Solyc04g076970.2.1 | Tomato | nucleus | 33.33 | 32.92 |
| Solyc02g076640.1.1 | Tomato | cytosol | 11.67 | 32.18 |
| Zm00001d040624_P001 | Maize | cytosol | 27.92 | 29.91 |
| KXG32375 | Sorghum | cytosol | 27.92 | 29.13 |
| Solyc02g073580.1.1 | Tomato | cytosol | 26.25 | 28.77 |
| Solyc03g006120.2.1 | Tomato | cytosol, mitochondrion | 23.75 | 28.64 |
| Solyc02g072570.1.1 | Tomato | cytosol | 28.75 | 27.6 |
| Zm00001d009087_P001 | Maize | cytosol | 25.83 | 27.56 |
| Solyc05g056410.1.1 | Tomato | cytosol | 30.83 | 27.11 |
| TraesCS2B01G512700.1 | Wheat | cytosol | 25.83 | 25.83 |
| Solyc07g062380.1.1 | Tomato | nucleus | 24.17 | 25.66 |
| Solyc12g014300.1.1 | Tomato | cytosol | 17.08 | 25.31 |
| Os01t0306400-01 | Rice | nucleus | 27.5 | 25.19 |
| TraesCS2A01G486100.1 | Wheat | mitochondrion | 25.42 | 24.5 |
| HORVU2Hr1G108600.1 | Barley | cytosol | 12.92 | 24.22 |
| Solyc02g073570.1.1 | Tomato | nucleus | 27.5 | 23.66 |
Protein Annotations
| EnsemblPlants:Solyc09g005610.2.1 | EnsemblPlantsGene:Solyc09g005610.2 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0043565 | InterPro:IPR025422 | InterPro:TGA_domain | PANTHER:PTHR22952 | PANTHER:PTHR22952:SF145 | PFAM:PF14144 |
| PFscan:PS51806 | SEG:seg | UniParc:UPI000276B127 | UniProt:K4CQ51 | MapMan:15.5.4.5 | : |
Description
No Description!
Coordinates
chr9:-:422346..423916
Molecular Weight (calculated)
27544.2 Da
IEP (calculated)
4.701
GRAVY (calculated)
-0.260
Length
240 amino acids
Sequence
(BLAST)
(BLAST)
001: MPPGSSRANI SVGSFEAFLQ GWLIRQEELL NELTTTQNTL DESIIRNLIS RILAHYQEYY EEKSRMSHIN VFYMFSPSWF SPLEKSFLWI AGFKPGLAFP
101: LVMNSVNDLT ENQIEMINGL KIETRIQERD LMDKLAKIQE SVAAPPLMGL AQQYRMEMLQ DGEISEVDEE IEIIRTAMEN VVTDADRLRT KTADSVVGIL
201: NPLQSLKFLA AAAQLQLRIR MIGMQREAER RHQMDTSNGW
101: LVMNSVNDLT ENQIEMINGL KIETRIQERD LMDKLAKIQE SVAAPPLMGL AQQYRMEMLQ DGEISEVDEE IEIIRTAMEN VVTDADRLRT KTADSVVGIL
201: NPLQSLKFLA AAAQLQLRIR MIGMQREAER RHQMDTSNGW
001: MPITSSSETF ASFFNDWLCR HRQFVQQLAH LADETTIVTP IEEESLVSNF LSHYLQYYEE KSVAMSVAGD DIYDFFSPPW LSSYEKLILW IGGFKPGMVF
101: KLITTSVNDL TSHQIDQLES IRLETKRRER DLMRRFALLQ QSVGDPLLMV PFRRIGVLRL GEGEQPEMED AMEVLKVEMI KAMKNADQLR CVTVGKVVEV
201: LNPRQSIKLL RAAGEFYLRL RDLGV
101: KLITTSVNDL TSHQIDQLES IRLETKRRER DLMRRFALLQ QSVGDPLLMV PFRRIGVLRL GEGEQPEMED AMEVLKVEMI KAMKNADQLR CVTVGKVVEV
201: LNPRQSIKLL RAAGEFYLRL RDLGV
Arabidopsis Description
ZW2At1g58330 [Source:UniProtKB/TrEMBL;Acc:Q9SLV1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.