Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G486100.1 | Wheat | mitochondrion | 94.17 | 90.76 |
| HORVU2Hr1G108600.1 | Barley | cytosol | 40.83 | 76.56 |
| KXG32375 | Sorghum | cytosol | 71.25 | 74.35 |
| Zm00001d040624_P001 | Maize | cytosol | 68.33 | 73.21 |
| Zm00001d009087_P001 | Maize | cytosol | 66.67 | 71.11 |
| Os01t0306400-01 | Rice | nucleus | 75.42 | 69.08 |
| KRH52855 | Soybean | cytosol | 23.75 | 34.13 |
| Bra013337.1-P | Field mustard | cytosol | 24.58 | 29.06 |
| Solyc02g076640.1.1 | Tomato | cytosol | 10.42 | 28.74 |
| AT4G18650.1 | Thale cress | cytosol | 27.5 | 28.45 |
| Bra019973.1-P | Field mustard | cytosol, plastid | 27.08 | 28.26 |
| CDX93460 | Canola | cytosol, plastid | 27.08 | 28.26 |
| CDX94928 | Canola | plastid | 26.67 | 27.83 |
| CDX78882 | Canola | cytosol | 27.08 | 27.2 |
| Solyc10g085210.1.1 | Tomato | cytosol | 27.5 | 26.83 |
| CDX99446 | Canola | cytosol | 26.67 | 26.78 |
| PGSC0003DMT400011369 | Potato | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 26.67 | 26.67 |
| PGSC0003DMT400028833 | Potato | cytosol | 27.5 | 26.61 |
| AT1G09950.1 | Thale cress | cytosol | 25.42 | 26.52 |
| Bra031691.1-P | Field mustard | plastid | 25.0 | 25.97 |
| CDY22613 | Canola | cytosol, plastid | 25.0 | 25.86 |
| Solyc09g005610.2.1 | Tomato | cytosol | 25.83 | 25.83 |
| TraesCS1B01G420300.1 | Wheat | mitochondrion | 24.17 | 25.66 |
| KRH21250 | Soybean | cytosol | 27.08 | 25.59 |
| PGSC0003DMT400028832 | Potato | cytosol | 11.67 | 25.23 |
| AT1G58330.1 | Thale cress | cytosol | 22.92 | 24.44 |
| KRH49400 | Soybean | cytosol | 23.33 | 24.03 |
| TraesCS3B01G120900.1 | Wheat | cytosol | 25.83 | 23.85 |
| PGSC0003DMT400012745 | Potato | cytosol | 23.33 | 23.73 |
| PGSC0003DMT400026417 | Potato | cytosol | 21.67 | 23.42 |
| Solyc02g073580.1.1 | Tomato | cytosol | 21.25 | 23.29 |
| KRH00273 | Soybean | cytosol | 22.5 | 23.28 |
| Solyc04g076970.2.1 | Tomato | nucleus | 23.33 | 23.05 |
| KRH11036 | Soybean | plastid | 27.5 | 22.76 |
| TraesCS3B01G330400.1 | Wheat | cytosol | 22.5 | 18.31 |
Protein Annotations
| EnsemblPlants:TraesCS2B01G512700.1 | EnsemblPlantsGene:TraesCS2B01G512700 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0043565 | InterPro:IPR025422 | InterPro:TGA_domain | ncoils:Coil | PANTHER:PTHR22952 | PANTHER:PTHR22952:SF145 |
| PFAM:PF14144 | PFscan:PS51806 | SEG:seg | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr2B:+:708124548..708125270
Molecular Weight (calculated)
26180.2 Da
IEP (calculated)
9.566
GRAVY (calculated)
-0.215
Length
240 amino acids
Sequence
(BLAST)
(BLAST)
001: MPPHPKNAAV GSWYMAHAGD MVAFYDAWVG REEEMVSDLT AALGARRRDA LAPLVDAAMD HVATYYEHKA SLADRDVVAA LDQRWLNPLE RTFLWAWGWR
101: PALVFRFVDG GAVGPRQRRE LEDLRAATAA AEKEVDREVA AVQESLAGPR VLEALRQRRQ HPRNGVQADE AVAAVGRSLR VLLAAGDALR ERTVRGVVGV
201: LAPDAEQAGA FVAAMLRFHL GVHRAGRAWS SGHGGGRRGL
101: PALVFRFVDG GAVGPRQRRE LEDLRAATAA AEKEVDREVA AVQESLAGPR VLEALRQRRQ HPRNGVQADE AVAAVGRSLR VLLAAGDALR ERTVRGVVGV
201: LAPDAEQAGA FVAAMLRFHL GVHRAGRAWS SGHGGGRRGL
001: MSKMRNLVEE KFLEFYESWV IQLELYLHQL LIAHNNNTMS ETELRHLISK LTTHHKAYYT AKWAAIREDV LAFFGSVWLN PLENACSWLT GWKPSMVFRM
101: VDRLRKSRVV LVEAQVKKLE ELRVKTKFDE QKIEREMERY QVAMADRKMV ELARLGCHVG GESVMVVEAA VRGLSMGLEK MVKAADCVRL KTLKGILDIL
201: TPPQCVEFLA AAATFQVQLR RWGNRRHYVT HS
101: VDRLRKSRVV LVEAQVKKLE ELRVKTKFDE QKIEREMERY QVAMADRKMV ELARLGCHVG GESVMVVEAA VRGLSMGLEK MVKAADCVRL KTLKGILDIL
201: TPPQCVEFLA AAATFQVQLR RWGNRRHYVT HS
Arabidopsis Description
DOGL4Protein DOG1-like 4 [Source:UniProtKB/Swiss-Prot;Acc:Q84JC2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.