Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX78882 | Canola | cytosol | 82.76 | 80.33 |
| CDX99446 | Canola | cytosol | 82.76 | 80.33 |
| Bra013337.1-P | Field mustard | cytosol | 69.4 | 79.31 |
| Solyc02g073580.1.1 | Tomato | cytosol | 49.57 | 52.51 |
| PGSC0003DMT400026417 | Potato | cytosol | 50.0 | 52.25 |
| Solyc02g076640.1.1 | Tomato | cytosol | 18.97 | 50.57 |
| KRH21250 | Soybean | cytosol | 53.02 | 48.43 |
| KRH11036 | Soybean | plastid | 53.02 | 42.41 |
| Zm00001d040624_P001 | Maize | cytosol | 28.45 | 29.46 |
| KXG32375 | Sorghum | cytosol | 28.45 | 28.7 |
| Zm00001d009087_P001 | Maize | cytosol | 26.72 | 27.56 |
| TraesCS2B01G512700.1 | Wheat | cytosol | 28.45 | 27.5 |
| TraesCS2A01G486100.1 | Wheat | mitochondrion | 28.88 | 26.91 |
| AT1G58330.1 | Thale cress | cytosol | 25.43 | 26.22 |
| Os01t0306400-01 | Rice | nucleus | 28.88 | 25.57 |
| AT1G09950.1 | Thale cress | cytosol | 25.0 | 25.22 |
| HORVU2Hr1G108600.1 | Barley | cytosol | 13.79 | 25.0 |
| AT3G14880.1 | Thale cress | nucleus | 26.29 | 25.0 |
| AT4G18680.1 | Thale cress | cytosol | 22.41 | 22.13 |
| AT4G18690.1 | Thale cress | cytosol | 25.0 | 20.57 |
| AT5G45830.1 | Thale cress | nucleus | 25.86 | 18.58 |
Protein Annotations
| MapMan:15.5.4.5 | EntrezGene:827599 | ProteinID:AEE84072.1 | ArrayExpress:AT4G18650 | EnsemblPlantsGene:AT4G18650 | RefSeq:AT4G18650 |
| TAIR:AT4G18650 | RefSeq:AT4G18650-TAIR-G | EnsemblPlants:AT4G18650.1 | TAIR:AT4G18650.1 | Unigene:At.32878 | EMBL:BT003897 |
| EMBL:BT005177 | ProteinID:CAB37450.1 | ProteinID:CAB78867.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | InterPro:IPR025422 | RefSeq:NP_193600.2 | PFAM:PF14144 |
| PFscan:PS51806 | PANTHER:PTHR22952 | PANTHER:PTHR22952:SF143 | UniProt:Q84JC2 | InterPro:TGA_domain | UniParc:UPI000000C1CC |
Description
DOGL4Protein DOG1-like 4 [Source:UniProtKB/Swiss-Prot;Acc:Q84JC2]
Coordinates
chr4:-:10263969..10265439
Molecular Weight (calculated)
27025.3 Da
IEP (calculated)
9.751
GRAVY (calculated)
-0.162
Length
232 amino acids
Sequence
(BLAST)
(BLAST)
001: MSKMRNLVEE KFLEFYESWV IQLELYLHQL LIAHNNNTMS ETELRHLISK LTTHHKAYYT AKWAAIREDV LAFFGSVWLN PLENACSWLT GWKPSMVFRM
101: VDRLRKSRVV LVEAQVKKLE ELRVKTKFDE QKIEREMERY QVAMADRKMV ELARLGCHVG GESVMVVEAA VRGLSMGLEK MVKAADCVRL KTLKGILDIL
201: TPPQCVEFLA AAATFQVQLR RWGNRRHYVT HS
101: VDRLRKSRVV LVEAQVKKLE ELRVKTKFDE QKIEREMERY QVAMADRKMV ELARLGCHVG GESVMVVEAA VRGLSMGLEK MVKAADCVRL KTLKGILDIL
201: TPPQCVEFLA AAATFQVQLR RWGNRRHYVT HS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.