Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 2
- cytosol 2
- mitochondrion 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX93460 | Canola | cytosol, plastid | 82.61 | 82.61 |
| Bra019973.1-P | Field mustard | cytosol, plastid | 81.74 | 81.74 |
| CDX94928 | Canola | plastid | 79.57 | 79.57 |
| CDY22613 | Canola | cytosol, plastid | 80.0 | 79.31 |
| Bra031691.1-P | Field mustard | plastid | 78.7 | 78.36 |
| AT1G58330.1 | Thale cress | cytosol | 54.35 | 55.56 |
| KRH52855 | Soybean | cytosol | 24.78 | 34.13 |
| PGSC0003DMT400012745 | Potato | cytosol | 33.91 | 33.05 |
| Solyc04g076970.2.1 | Tomato | nucleus | 34.35 | 32.51 |
| Zm00001d040624_P001 | Maize | cytosol | 28.26 | 29.02 |
| KXG32375 | Sorghum | cytosol | 28.7 | 28.7 |
| Zm00001d009087_P001 | Maize | cytosol | 27.39 | 28.0 |
| TraesCS2B01G512700.1 | Wheat | cytosol | 26.52 | 25.42 |
| AT4G18650.1 | Thale cress | cytosol | 25.22 | 25.0 |
| Os01t0306400-01 | Rice | nucleus | 28.26 | 24.81 |
| TraesCS2A01G486100.1 | Wheat | mitochondrion | 26.52 | 24.5 |
| AT4G18680.1 | Thale cress | cytosol | 21.74 | 21.28 |
| HORVU2Hr1G108600.1 | Barley | cytosol | 11.74 | 21.09 |
| AT3G14880.1 | Thale cress | nucleus | 20.0 | 18.85 |
| AT4G18690.1 | Thale cress | cytosol | 23.04 | 18.79 |
| AT5G45830.1 | Thale cress | nucleus | 20.87 | 14.86 |
Protein Annotations
| MapMan:15.5.4.5 | EntrezGene:837529 | ProteinID:AAB60750.1 | ProteinID:AEE28520.1 | EMBL:AK228972 | ArrayExpress:AT1G09950 |
| EnsemblPlantsGene:AT1G09950 | RefSeq:AT1G09950 | TAIR:AT1G09950 | RefSeq:AT1G09950-TAIR-G | EnsemblPlants:AT1G09950.1 | TAIR:AT1G09950.1 |
| EMBL:BT012212 | EMBL:BT012400 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0043565 | InterPro:IPR025422 | RefSeq:NP_172466.1 | UniProt:O04515 | PFAM:PF14144 | PO:PO:0000293 |
| PO:PO:0007611 | PO:PO:0009005 | PO:PO:0009025 | PO:PO:0009046 | PO:PO:0020137 | PFscan:PS51806 |
| PANTHER:PTHR22952 | PANTHER:PTHR22952:SF145 | Symbol:RAS1 | InterPro:TGA_domain | UniParc:UPI00000A67F9 | : |
Description
RAS1At1g09950 [Source:UniProtKB/TrEMBL;Acc:O04515]
Coordinates
chr1:-:3240531..3241863
Molecular Weight (calculated)
26095.4 Da
IEP (calculated)
6.518
GRAVY (calculated)
-0.168
Length
230 amino acids
Sequence
(BLAST)
(BLAST)
001: MPNTSSSQSF TIFVDGWLIR HRYFVEQLMC ASSLDETNRI SLEEQQSLVA QFLSHCLQYY QEKFASVSLA GDNVFTFFCP PWFNSYAKLI LWVGDFKPSL
101: VFKLTEVSVA DLTRHQKDRI SSLKSETRRK EREVMRDFAL VQQSVADPPV MLAARRVGAV GMVDGEETDL EEAMEVLKAG MAAAMNNADQ LRCSTVGKVV
201: EILTPPQAIK VLRTIGQLHL RLRDRDQERA
101: VFKLTEVSVA DLTRHQKDRI SSLKSETRRK EREVMRDFAL VQQSVADPPV MLAARRVGAV GMVDGEETDL EEAMEVLKAG MAAAMNNADQ LRCSTVGKVV
201: EILTPPQAIK VLRTIGQLHL RLRDRDQERA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.