Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 4
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G512700.1 | Wheat | cytosol | 90.76 | 94.17 |
| KXG32375 | Sorghum | cytosol | 68.67 | 74.35 |
| HORVU2Hr1G108600.1 | Barley | cytosol | 38.15 | 74.22 |
| Zm00001d040624_P001 | Maize | cytosol | 66.27 | 73.66 |
| Zm00001d009087_P001 | Maize | cytosol | 63.86 | 70.67 |
| Os01t0306400-01 | Rice | nucleus | 72.69 | 69.08 |
| KRH52855 | Soybean | cytosol | 22.89 | 34.13 |
| Bra013337.1-P | Field mustard | cytosol | 24.1 | 29.56 |
| AT4G18650.1 | Thale cress | cytosol | 26.91 | 28.88 |
| Solyc02g076640.1.1 | Tomato | cytosol | 10.04 | 28.74 |
| CDX93460 | Canola | cytosol, plastid | 26.51 | 28.7 |
| Bra019973.1-P | Field mustard | cytosol, plastid | 26.51 | 28.7 |
| CDX94928 | Canola | plastid | 26.1 | 28.26 |
| CDX78882 | Canola | cytosol | 26.51 | 27.62 |
| CDX99446 | Canola | cytosol | 26.1 | 27.2 |
| Solyc10g085210.1.1 | Tomato | cytosol | 26.51 | 26.83 |
| PGSC0003DMT400028833 | Potato | cytosol | 26.51 | 26.61 |
| AT1G09950.1 | Thale cress | cytosol | 24.5 | 26.52 |
| Bra031691.1-P | Field mustard | plastid | 24.5 | 26.41 |
| CDY22613 | Canola | cytosol, plastid | 24.5 | 26.29 |
| PGSC0003DMT400011369 | Potato | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 25.3 | 26.25 |
| TraesCS1A01G392200.1 | Wheat | mitochondrion | 23.69 | 26.11 |
| KRH21250 | Soybean | cytosol | 26.1 | 25.59 |
| Solyc09g005610.2.1 | Tomato | cytosol | 24.5 | 25.42 |
| AT1G58330.1 | Thale cress | cytosol | 22.89 | 25.33 |
| PGSC0003DMT400028832 | Potato | cytosol | 11.24 | 25.23 |
| TraesCS3A01G103500.1 | Wheat | cytosol | 26.1 | 25.0 |
| PGSC0003DMT400012745 | Potato | cytosol | 22.49 | 23.73 |
| KRH49400 | Soybean | cytosol | 22.09 | 23.61 |
| PGSC0003DMT400026417 | Potato | cytosol | 20.88 | 23.42 |
| Solyc02g073580.1.1 | Tomato | cytosol | 20.48 | 23.29 |
| Solyc04g076970.2.1 | Tomato | nucleus | 22.49 | 23.05 |
| KRH00273 | Soybean | cytosol | 21.29 | 22.84 |
| KRH11036 | Soybean | plastid | 26.51 | 22.76 |
| TraesCS3A01G306200.1 | Wheat | cytosol | 22.89 | 19.26 |
| TraesCS2A01G010800.1 | Wheat | cytosol | 15.26 | 19.19 |
Protein Annotations
| EnsemblPlants:TraesCS2A01G486100.1 | EnsemblPlantsGene:TraesCS2A01G486100 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0043565 | InterPro:IPR025422 | InterPro:TGA_domain | ncoils:Coil | PANTHER:PTHR22952 | PANTHER:PTHR22952:SF145 |
| PFAM:PF14144 | PFscan:PS51806 | SEG:seg | MapMan:35.2 | : | : |
Description
No Description!
Coordinates
chr2A:+:721468836..721469585
Molecular Weight (calculated)
27382.6 Da
IEP (calculated)
10.793
GRAVY (calculated)
-0.327
Length
249 amino acids
Sequence
(BLAST)
(BLAST)
001: MPALPRPARC RRRRTHEHTS YMAHAGEMAS FYDAWVGREE EMVSDLTAAL GARRRDALAP LVDAAMDHVA AYYEHKASLA DRDVVAALDQ RWLNPLERTF
101: LWAWGWRPAL VFRFVDGSGA VGPRQRRELE DLRAATAAAE KEVDREVAAV QESLAGPRVL EALRQRRQHP RNGVQADEAV AAVGRSLRVL LAAGDALRER
201: TVRGVVGVLA PDAEQAGAFV AAMLRFHLGV HRAGRAWSSS GRGGGRRGL
101: LWAWGWRPAL VFRFVDGSGA VGPRQRRELE DLRAATAAAE KEVDREVAAV QESLAGPRVL EALRQRRQHP RNGVQADEAV AAVGRSLRVL LAAGDALRER
201: TVRGVVGVLA PDAEQAGAFV AAMLRFHLGV HRAGRAWSSS GRGGGRRGL
001: MSKMRNLVEE KFLEFYESWV IQLELYLHQL LIAHNNNTMS ETELRHLISK LTTHHKAYYT AKWAAIREDV LAFFGSVWLN PLENACSWLT GWKPSMVFRM
101: VDRLRKSRVV LVEAQVKKLE ELRVKTKFDE QKIEREMERY QVAMADRKMV ELARLGCHVG GESVMVVEAA VRGLSMGLEK MVKAADCVRL KTLKGILDIL
201: TPPQCVEFLA AAATFQVQLR RWGNRRHYVT HS
101: VDRLRKSRVV LVEAQVKKLE ELRVKTKFDE QKIEREMERY QVAMADRKMV ELARLGCHVG GESVMVVEAA VRGLSMGLEK MVKAADCVRL KTLKGILDIL
201: TPPQCVEFLA AAATFQVQLR RWGNRRHYVT HS
Arabidopsis Description
DOGL4Protein DOG1-like 4 [Source:UniProtKB/Swiss-Prot;Acc:Q84JC2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.