Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT1G58330.1 | Thale cress | cytosol | 39.52 | 29.33 |
| Bra019973.1-P | Field mustard | cytosol, plastid | 38.32 | 27.83 |
| CDX93460 | Canola | cytosol, plastid | 38.32 | 27.83 |
| KXG32375 | Sorghum | cytosol | 37.72 | 27.39 |
| CDY22613 | Canola | cytosol, plastid | 37.72 | 27.16 |
| Bra031691.1-P | Field mustard | plastid | 37.13 | 26.84 |
| Zm00001d040624_P001 | Maize | cytosol | 35.93 | 26.79 |
| CDX94928 | Canola | plastid | 36.53 | 26.52 |
| Zm00001d009087_P001 | Maize | cytosol | 35.33 | 26.22 |
| KRH00273 | Soybean | cytosol | 35.33 | 25.43 |
| KRH49400 | Soybean | cytosol | 34.73 | 24.89 |
| AT1G09950.1 | Thale cress | cytosol | 34.13 | 24.78 |
| PGSC0003DMT400012745 | Potato | cytosol | 34.73 | 24.58 |
| TraesCS2B01G512700.1 | Wheat | cytosol | 34.13 | 23.75 |
| Os01t0306400-01 | Rice | nucleus | 37.13 | 23.66 |
| Solyc04g076970.2.1 | Tomato | nucleus | 33.53 | 23.05 |
| TraesCS2A01G486100.1 | Wheat | mitochondrion | 34.13 | 22.89 |
| KRH21250 | Soybean | cytosol | 31.74 | 20.87 |
| KRH59621 | Soybean | cytosol | 32.34 | 18.95 |
| KRH11036 | Soybean | plastid | 32.34 | 18.62 |
| KRH21958 | Soybean | cytosol | 28.74 | 17.91 |
| KRH04319 | Soybean | cytosol | 20.96 | 16.59 |
| HORVU2Hr1G108600.1 | Barley | cytosol | 11.38 | 14.84 |
| KRH58220 | Soybean | cytosol | 14.37 | 12.5 |
Protein Annotations
| MapMan:35.2 | EMBL:ACUP02003439 | ncoils:Coil | EnsemblPlantsGene:GLYMA_06G090900 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | InterPro:IPR025422 | UniProt:K7KU33 | EnsemblPlants:KRH52855 |
| ProteinID:KRH52855 | ProteinID:KRH52855.1 | PFAM:PF14144 | PFscan:PS51806 | PANTHER:PTHR22952 | PANTHER:PTHR22952:SF145 |
| InterPro:TGA_domain | UniParc:UPI0002956DA2 | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr6:-:7098418..7098962
Molecular Weight (calculated)
18891.0 Da
IEP (calculated)
10.545
GRAVY (calculated)
-0.336
Length
167 amino acids
Sequence
(BLAST)
(BLAST)
001: WRAMVLSHYQ QFMEEKSNVA NDDVYLLFSP PWLSAYERAL LWIGDYKPSL IHRLVDGAVK GLTAEQRGRV ERTRDKTKRA ERELTEAVAS VQESMANNGA
101: GAALEGLGKA LEKVLERADE LRALAMRKVV GILSPPRTVA LLAATMHFQM RVRMWGLQRA EVGRSRR
101: GAALEGLGKA LEKVLERADE LRALAMRKVV GILSPPRTVA LLAATMHFQM RVRMWGLQRA EVGRSRR
001: MPITSSSETF ASFFNDWLCR HRQFVQQLAH LADETTIVTP IEEESLVSNF LSHYLQYYEE KSVAMSVAGD DIYDFFSPPW LSSYEKLILW IGGFKPGMVF
101: KLITTSVNDL TSHQIDQLES IRLETKRRER DLMRRFALLQ QSVGDPLLMV PFRRIGVLRL GEGEQPEMED AMEVLKVEMI KAMKNADQLR CVTVGKVVEV
201: LNPRQSIKLL RAAGEFYLRL RDLGV
101: KLITTSVNDL TSHQIDQLES IRLETKRRER DLMRRFALLQ QSVGDPLLMV PFRRIGVLRL GEGEQPEMED AMEVLKVEMI KAMKNADQLR CVTVGKVVEV
201: LNPRQSIKLL RAAGEFYLRL RDLGV
Arabidopsis Description
ZW2At1g58330 [Source:UniProtKB/TrEMBL;Acc:Q9SLV1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.