Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH59621 | Soybean | cytosol | 71.35 | 48.07 |
| KRH04319 | Soybean | cytosol | 45.31 | 41.23 |
| VIT_07s0031g02670.t01 | Wine grape | nucleus | 43.75 | 32.94 |
| Os01t0159000-01 | Rice | plastid | 30.21 | 32.04 |
| Solyc05g056410.1.1 | Tomato | cytosol | 40.1 | 28.21 |
| PGSC0003DMT400059950 | Potato | cytosol | 40.62 | 27.46 |
| TraesCS3D01G105800.1 | Wheat | cytosol | 36.98 | 27.31 |
| TraesCS3A01G103500.1 | Wheat | cytosol | 36.46 | 26.92 |
| GSMUA_Achr5P28280_001 | Banana | cytosol | 37.5 | 26.67 |
| TraesCS3B01G120900.1 | Wheat | cytosol | 35.42 | 26.15 |
| TraesCS2A01G010800.1 | Wheat | cytosol | 25.0 | 24.24 |
| Zm00001d039771_P001 | Maize | plastid | 33.33 | 23.53 |
| OQU86274 | Sorghum | plastid | 31.25 | 21.51 |
| HORVU3Hr1G018820.1 | Barley | extracellular | 19.79 | 21.47 |
| KRH21250 | Soybean | cytosol | 25.52 | 19.29 |
| KRH49400 | Soybean | cytosol | 22.92 | 18.88 |
| KRH00273 | Soybean | cytosol | 22.4 | 18.53 |
| KRH21958 | Soybean | cytosol | 23.96 | 17.16 |
| KRH11036 | Soybean | plastid | 25.52 | 16.9 |
| KRH52855 | Soybean | cytosol | 12.5 | 14.37 |
Protein Annotations
| MapMan:35.2 | UniProt:A0A0R0JTU9 | EMBL:ACUP02003233 | EnsemblPlantsGene:GLYMA_05G113200 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | InterPro:IPR025422 | EnsemblPlants:KRH58220 | ProteinID:KRH58220 |
| ProteinID:KRH58220.1 | PFAM:PF14144 | PFscan:PS51806 | PANTHER:PTHR22952 | PANTHER:PTHR22952:SF268 | InterPro:TGA_domain |
| UniParc:UPI0006EDBC08 | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr5:-:30046341..30046980
Molecular Weight (calculated)
22592.6 Da
IEP (calculated)
4.715
GRAVY (calculated)
-0.507
Length
192 amino acids
Sequence
(BLAST)
(BLAST)
001: MSIVSGTHTT EKYNYESFQE FFECWMFEQN QHLKELLAAE STHLTDEQVQ ALNGRVIEHY EHYYTAKLSC AKQDVLAIPS MAFHLLYSKF GLQFEARFDE
101: LIRGLRTHDL GDISASQLAQ LDETQRRTII EEREVTDLME THQESLVDAP MVELSHVVAE MIRANETGEN KEIEDKVEST LCQWWKVWRR FR
101: LIRGLRTHDL GDISASQLAQ LDETQRRTII EEREVTDLME THQESLVDAP MVELSHVVAE MIRANETGEN KEIEDKVEST LCQWWKVWRR FR
001: MSQETAIASF KKFQQSWIEQ LRNHLNHLRS AQNHHRNSAT GDEERLREAV DRVMEHFREY HRAKWAATDK DVIEVMASPW ASALERSLQW VGGWRPTTLF
101: HLVYTESSIL FESRIVDILR GFRTGDLSDL SPSQFRTVSE LQCETVKEEN AITEELSEWQ DDASDLVMGT SSDPDQRIRR LAEIVHRTDD LRLRTITRVV
201: EVLSPLQQAE FLVAAAELRT GVAGWGTSHD RRRSSEV
101: HLVYTESSIL FESRIVDILR GFRTGDLSDL SPSQFRTVSE LQCETVKEEN AITEELSEWQ DDASDLVMGT SSDPDQRIRR LAEIVHRTDD LRLRTITRVV
201: EVLSPLQQAE FLVAAAELRT GVAGWGTSHD RRRSSEV
Arabidopsis Description
DNA-binding protein-like protein [Source:UniProtKB/TrEMBL;Acc:Q9LKB6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.