CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 2
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc07g062380.1.1	Tomato	nucleus	47.39	56.19
Bra027297.1-P	Field mustard	nucleus	46.27	52.32
CDX97614	Canola	nucleus	46.27	52.32
CDX98510	Canola	nucleus	46.27	52.32
CDY70896	Canola	nucleus	46.27	52.32
PGSC0003DMT400018207	Potato	nucleus	32.84	50.87
VIT_19s0014g01450.t01	Wine grape	cytosol, mitochondrion, peroxisome	42.91	50.66
AT3G14880.1	Thale cress	nucleus	45.9	50.41
PGSC0003DMT400039657	Potato	cytosol	40.67	48.66
VIT_19s0014g01210.t01	Wine grape	cytosol	41.42	48.05
Solyc12g014300.1.1	Tomato	cytosol	28.36	46.91
GSMUA_Achr1P11520_001	Banana	cytosol	31.34	37.17
Os05t0560200-00	Rice	mitochondrion	27.99	33.63
TraesCS1D01G400300.1	Wheat	mitochondrion	28.36	33.63
TraesCS1B01G420300.1	Wheat	mitochondrion	28.36	33.63
TraesCS1A01G392200.1	Wheat	mitochondrion	28.36	33.63
HORVU1Hr1G086580.1	Barley	mitochondrion	28.36	33.33
Zm00001d038990_P001	Maize	cytosol, mitochondrion	28.36	32.76
EES19938	Sorghum	cytosol, mitochondrion	27.99	32.47
KRH59621	Soybean	cytosol	32.84	30.88
KRH52855	Soybean	cytosol	17.91	28.74
KRH49400	Soybean	cytosol	22.39	25.75
KRH00273	Soybean	cytosol	21.27	24.57
KRH04319	Soybean	cytosol	19.03	24.17
KRH58220	Soybean	cytosol	17.16	23.96
KRH21250	Soybean	cytosol	21.64	22.83
KRH11036	Soybean	plastid	20.9	19.31

Protein Annotations

MapMan:15.5.4.5	EntrezGene:778192	EMBL:ACUP02008373	EnsemblPlantsGene:GLYMA_13G269500	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	GO:GO:0006139	GO:GO:0006351	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009628	GO:GO:0009987	GO:GO:0043565	GO:GO:0080167	InterPro:IPR025422
UniProt:K7M272	EnsemblPlants:KRH21958	ProteinID:KRH21958	ProteinID:KRH21958.1	PFAM:PF14144	PFscan:PS51806
PANTHER:PTHR22952	PANTHER:PTHR22952:SF195	InterPro:TGA_domain	UniParc:UPI00023CFB24	:	:

Description

hypothetical protein

Coordinates

chr13:+:37167036..37168962

Molecular Weight (calculated)

30489.4 Da

IEP (calculated)

6.239

GRAVY (calculated)

-0.370

Length

268 amino acids

Sequence
(BLAST)

001: MRQVETLRES HVNMHAPSPQ PLSVLFINPH SYITISNGQK RATMNNPSSP SPCAAFADFY EQWFEELQSL MQQLRGEGRK EEVMEKVMWH HQNYYVAKSA
101: AAEKDPLNVF LSPWATTLER SLHWITGWRP TTAFHLIYTE SSLMFESHII DILQGLRTGD LGDLSPSQFR RVSDIQCDTV KEENAITEEL SEWQDSVSEM
201: MGPGANINDK IGRLVCIIKK ADDLRLRTLR SVVGLLSPQQ AIEFLIASAE LLVGIRGWGL NHDRPRGR

Best Arabidopsis Sequence Match ( AT3G14880.2 )
(BLAST)

001: MSQETAIASF KKFQQSWIEQ LRNHLNHLRS AQNHHRNSAT GDEERLREAV DRVMEHFREY HRAKWAATDK DVIEVMASPW ASALERSLQW VGGWRPTTLF
101: HLVYTESSIL FESRIVDILR GFRTGDLSDL SPSQFRTVSE LQCETVKEEN AITEELSEWQ DDASDLVMGT SSDPDQRIRR LAEIVHRTDD LRLRTITRVV
201: EVLSPLQQAE FLVAAAELRT GVAGWGTSHD RRRSSEV

Arabidopsis Description

DNA-binding protein-like protein [Source:UniProtKB/TrEMBL;Acc:Q9LKB6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.