Factsheet for Bra031691.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 4
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY22613	Canola	cytosol, plastid	95.24	94.83
Bra019973.1-P	Field mustard	cytosol, plastid	84.85	85.22
AT1G09950.1	Thale cress	cytosol	78.36	78.7
KRH52855	Soybean	cytosol	26.84	37.13
PGSC0003DMT400012745	Potato	cytosol	33.77	33.05
Solyc04g076970.2.1	Tomato	nucleus	34.63	32.92
Zm00001d040624_P001	Maize	cytosol	27.27	28.12
KXG32375	Sorghum	cytosol	26.84	26.96
Zm00001d009087_P001	Maize	cytosol	25.54	26.22
Bra013337.1-P	Field mustard	cytosol	22.51	25.62
TraesCS2B01G512700.1	Wheat	cytosol	25.97	25.0
TraesCS2A01G486100.1	Wheat	mitochondrion	26.41	24.5
Os01t0306400-01	Rice	nucleus	27.71	24.43
HORVU2Hr1G108600.1	Barley	cytosol	12.55	22.66
Bra013338.1-P	Field mustard	cytosol	24.24	22.22
Bra012582.1-P	Field mustard	cytosol	23.38	21.77
Bra027297.1-P	Field mustard	nucleus	20.35	19.83
Bra020997.1-P	Field mustard	nucleus	24.24	19.51
Bra017589.1-P	Field mustard	cytosol	22.51	18.57
Bra025050.1-P	Field mustard	nucleus	21.64	17.86

Protein Annotations

MapMan:15.5.4.5	EnsemblPlantsGene:Bra031691	EnsemblPlants:Bra031691.1	EnsemblPlants:Bra031691.1-P	ncoils:Coil	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0006139	GO:GO:0006351	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:IPR025422	UniProt:M4ESB3
PFAM:PF14144	PFscan:PS51806	PANTHER:PTHR22952	PANTHER:PTHR22952:SF145	InterPro:TGA_domain	UniParc:UPI000254321E
SEG:seg	:	:	:	:	:

Description

AT1G09950 (E=2e-094) | transcription factor-related

Coordinates

chrA09:+:35225907..35226602

Molecular Weight (calculated)

25904.0 Da

IEP (calculated)

5.726

GRAVY (calculated)

-0.158

Length

231 amino acids

Sequence
(BLAST)

001: MPITTSPQSF TSFANGWLIR HRHFVEQLAC ASSSDETNRI TLQDQQFLVT QFLSHCLQYY QAKSSAVSVA GDNVFTFFSP PWFTSYARLI LWVGDFKPSL
101: VFKLTDSSVD DLTRRQKDRI LSLRAETRRK ERDVMRDFAL VQQSVADPPV MAAARGVGAR GMVDGEESDL EEAMEVLKNG MAAAMNEADE LRCATVGRVV
201: EILTPSQAVK VLRTIGELHL RLRELVGLES E

Best Arabidopsis Sequence Match ( AT1G09950.1 )
(BLAST)

001: MPNTSSSQSF TIFVDGWLIR HRYFVEQLMC ASSLDETNRI SLEEQQSLVA QFLSHCLQYY QEKFASVSLA GDNVFTFFCP PWFNSYAKLI LWVGDFKPSL
101: VFKLTEVSVA DLTRHQKDRI SSLKSETRRK EREVMRDFAL VQQSVADPPV MLAARRVGAV GMVDGEETDL EEAMEVLKAG MAAAMNNADQ LRCSTVGKVV
201: EILTPPQAIK VLRTIGQLHL RLRDRDQERA

Arabidopsis Description

RAS1At1g09950 [Source:UniProtKB/TrEMBL;Acc:O04515]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.