Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 2
- cytosol 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400028833 | Potato | cytosol | 100.0 | 44.76 |
| Solyc10g085210.1.1 | Tomato | cytosol | 87.39 | 39.43 |
| PGSC0003DMT400011369 | Potato | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 61.26 | 28.33 |
| KRH49400 | Soybean | cytosol | 31.53 | 15.02 |
| KRH00273 | Soybean | cytosol | 30.63 | 14.66 |
| Zm00001d040624_P001 | Maize | cytosol | 27.03 | 13.39 |
| KXG32375 | Sorghum | cytosol | 27.03 | 13.04 |
| PGSC0003DMT400012745 | Potato | cytosol | 26.13 | 12.29 |
| Zm00001d009087_P001 | Maize | cytosol | 24.32 | 12.0 |
| Os01t0306400-01 | Rice | nucleus | 27.93 | 11.83 |
| TraesCS2B01G512700.1 | Wheat | cytosol | 25.23 | 11.67 |
| PGSC0003DMT400073133 | Potato | nucleus | 28.83 | 11.43 |
| TraesCS2A01G486100.1 | Wheat | mitochondrion | 25.23 | 11.24 |
| PGSC0003DMT400026417 | Potato | cytosol | 21.62 | 10.81 |
| PGSC0003DMT400068759 | Potato | cytosol | 21.62 | 10.26 |
| PGSC0003DMT400088909 | Potato | nucleus | 21.62 | 9.84 |
| PGSC0003DMT400073296 | Potato | nucleus | 21.62 | 9.56 |
| PGSC0003DMT400039657 | Potato | cytosol | 18.02 | 8.93 |
| PGSC0003DMT400073292 | Potato | cytosol | 18.92 | 8.4 |
| PGSC0003DMT400059950 | Potato | cytosol | 20.72 | 8.1 |
| PGSC0003DMT400018207 | Potato | nucleus | 6.31 | 4.05 |
| HORVU2Hr1G108600.1 | Barley | cytosol | 4.5 | 3.91 |
Protein Annotations
| MapMan:35.2 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0043565 | InterPro:IPR025422 | UniProt:M1ARS8 | EnsemblPlantsGene:PGSC0003DMG400011101 | PGSC:PGSC0003DMG400011101 | EnsemblPlants:PGSC0003DMT400028832 |
| PFscan:PS51806 | PANTHER:PTHR22952 | PANTHER:PTHR22952:SF145 | InterPro:TGA_domain | UniParc:UPI000296A851 | SEG:seg |
Description
Gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400011101]
Coordinates
chr10:+:53856660..53857278
Molecular Weight (calculated)
12633.1 Da
IEP (calculated)
4.884
GRAVY (calculated)
-0.519
Length
111 amino acids
Sequence
(BLAST)
(BLAST)
001: MTQIQESVAS PPLADLARRV GMQLIYTDNI NTEIEEIDGN IDQLKTALEN VVTDADRLRT RTAERVVGLL NPLQSLKFLS AVGQLQLRVR MMGMEREAER
101: QQQRNEHSNG W
101: QQQRNEHSNG W
001: MPNTSSSQSF TIFVDGWLIR HRYFVEQLMC ASSLDETNRI SLEEQQSLVA QFLSHCLQYY QEKFASVSLA GDNVFTFFCP PWFNSYAKLI LWVGDFKPSL
101: VFKLTEVSVA DLTRHQKDRI SSLKSETRRK EREVMRDFAL VQQSVADPPV MLAARRVGAV GMVDGEETDL EEAMEVLKAG MAAAMNNADQ LRCSTVGKVV
201: EILTPPQAIK VLRTIGQLHL RLRDRDQERA
101: VFKLTEVSVA DLTRHQKDRI SSLKSETRRK EREVMRDFAL VQQSVADPPV MLAARRVGAV GMVDGEETDL EEAMEVLKAG MAAAMNNADQ LRCSTVGKVV
201: EILTPPQAIK VLRTIGQLHL RLRDRDQERA
Arabidopsis Description
RAS1At1g09950 [Source:UniProtKB/TrEMBL;Acc:O04515]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.