Factsheet for PGSC0003DMT400073292

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g072570.1.1	Tomato	cytosol	90.4	90.4
PGSC0003DMT400073296	Potato	nucleus	57.6	57.37
PGSC0003DMT400068759	Potato	cytosol	45.2	48.29
PGSC0003DMT400088909	Potato	nucleus	46.8	47.95
PGSC0003DMT400073133	Potato	nucleus	46.0	41.07
VIT_19s0014g01220.t01	Wine grape	nucleus	36.4	36.99
CDX78883	Canola	cytosol, nucleus, plastid	18.0	36.0
CDX99444	Canola	cytosol, nucleus, plastid	18.4	35.11
AT4G18680.1	Thale cress	cytosol	31.6	33.62
CDY23102	Canola	nucleus	37.6	33.57
CDY52216	Canola	cytosol	37.6	33.57
Bra017589.1-P	Field mustard	cytosol	37.2	33.21
Bra013338.1-P	Field mustard	cytosol	33.2	32.94
Bra025050.1-P	Field mustard	nucleus	36.8	32.86
CDX76507	Canola	nucleus	31.2	32.64
CDY61468	Canola	cytosol	36.4	32.5
AT4G18690.1	Thale cress	cytosol	36.4	32.27
CDY58051	Canola	nucleus	36.0	32.14
CDY70293	Canola	cytosol	31.6	31.85
Bra012582.1-P	Field mustard	cytosol	31.6	31.85
Bra020997.1-P	Field mustard	nucleus	35.2	30.66
CDY66844	Canola	cytosol	34.8	30.53
GSMUA_Achr4P08070_001	Banana	cytosol	27.2	29.96
AT5G45830.1	Thale cress	nucleus	38.4	29.72
Zm00001d043390_P001	Maize	cytosol	34.8	29.29
PGSC0003DMT400039657	Potato	cytosol	26.0	29.02
TraesCS3D01G295800.1	Wheat	cytosol	33.2	28.42
TraesCS3A01G306200.1	Wheat	cytosol	33.6	28.38
TraesCS3B01G330400.1	Wheat	cytosol	33.2	28.14
PGSC0003DMT400011369	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	26.8	27.92
CDY34053	Canola	cytosol	36.0	27.61
OQU87585	Sorghum	cytosol	34.0	27.6
PGSC0003DMT400059950	Potato	cytosol	29.6	26.06
PGSC0003DMT400026417	Potato	cytosol	22.8	25.68
PGSC0003DMT400012745	Potato	cytosol	23.6	25.0
PGSC0003DMT400028833	Potato	cytosol	23.6	23.79
PGSC0003DMT400018207	Potato	nucleus	16.4	23.7
PGSC0003DMT400028832	Potato	cytosol	8.4	18.92

Protein Annotations

EntrezGene:107062767	MapMan:15.5.4.5	ncoils:Coil	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0006139	GO:GO:0006351	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0043565	InterPro:IPR025422	UniProt:M1CRR6	PFAM:PF14144	EnsemblPlantsGene:PGSC0003DMG400028480
PGSC:PGSC0003DMG400028480	EnsemblPlants:PGSC0003DMT400073292	PFscan:PS51806	PANTHER:PTHR22952	PANTHER:PTHR22952:SF210	InterPro:TGA_domain
UniParc:UPI0002962700	RefSeq:XP_015169246.1	:	:	:	:

Description

Delay of germination 1 [Source:PGSC_GENE;Acc:PGSC0003DMG400028480]

Coordinates

chr2:-:31908170..31908922

Molecular Weight (calculated)

28566.9 Da

IEP (calculated)

4.821

GRAVY (calculated)

-0.674

Length

250 amino acids

Sequence
(BLAST)

001: MASDSKKTDR EEQDYAKCVW KSLQHEELTE LEDAAAQVQN GEKDEEKLTQ LIEKIIKHFQ EHSDNRIRLA RKDVSPFFAP ATCSPLENSV LWIAGCRPSS
101: FIRLIYALCG FEPDVQGTDP CLEGMVTEDI RKLSGEQLSM INELQGKTIR EERRISTKLA SLQEEIVDQP LAGKMKKEGH DCEKADEALD EHSGHMADVI
201: EEADELRMKT LKEIVKILEP VQAVEYIAAA KKIRFCVQQW GEKRDQQHKE

Best Arabidopsis Sequence Match ( AT4G18690.1 )
(BLAST)

001: MATSSSSYGI EQLQKGCYYE WMSVQAKHIV DLKEALMSHR SKEDHKLEEL VGKIVNDFQK YTEKRSELSR RSCSSYFAPS WNSPLENGLL WMGGCRPSSF
101: IRVIYSLCGS QAETQLSQYL LKIDENVEVN HGGSMSDLNA SQLAKINDLH IKVIEKEDKI TKKSANLQEN VADMPIAIAA YATDLMNGDV VVEDALDKYE
201: EGMAVLMVEA DKLRFETLRK IVDVVTPVQA AEFLLAGKRL HISLHEWGRV REEQRFGCVR TDAAAATGGA GTEKSKRSSL LM

Arabidopsis Description

DOGL3Protein DOG1-like 3 [Source:UniProtKB/Swiss-Prot;Acc:Q58FV0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.