CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra017589.1-P	Field mustard	cytosol	98.93	98.93
CDY23102	Canola	nucleus	96.07	96.07
CDY58051	Canola	nucleus	88.57	88.57
CDY61468	Canola	cytosol	87.86	87.86
AT5G45830.1	Thale cress	nucleus	77.5	67.18
CDX78883	Canola	cytosol, nucleus, plastid	26.43	59.2
CDX99444	Canola	cytosol, nucleus, plastid	25.71	54.96
CDX76507	Canola	nucleus	42.86	50.21
CDY70293	Canola	cytosol	42.14	47.58
CDY66844	Canola	cytosol	47.5	46.67
CDY34053	Canola	cytosol	46.79	40.18
VIT_19s0014g01220.t01	Wine grape	nucleus	35.0	39.84
Solyc02g072570.1.1	Tomato	cytosol	35.0	39.2
Solyc03g006120.2.1	Tomato	cytosol, mitochondrion	26.79	37.69
PGSC0003DMT400073292	Potato	cytosol	33.57	37.6
PGSC0003DMT400073296	Potato	nucleus	32.5	36.26
PGSC0003DMT400088909	Potato	nucleus	31.07	35.66
Solyc02g073570.1.1	Tomato	nucleus	34.29	34.41
PGSC0003DMT400073133	Potato	nucleus	34.29	34.29
PGSC0003DMT400068759	Potato	cytosol	27.86	33.33
Zm00001d043390_P001	Maize	cytosol	32.5	30.64
OQU87585	Sorghum	cytosol	33.21	30.19
GSMUA_Achr4P08070_001	Banana	cytosol	23.93	29.52
TraesCS3A01G306200.1	Wheat	cytosol	31.07	29.39
TraesCS3B01G330400.1	Wheat	cytosol	30.71	29.15
TraesCS3D01G295800.1	Wheat	cytosol	30.36	29.11
CDX97614	Canola	nucleus	23.21	27.43
CDY70896	Canola	nucleus	22.5	26.58
CDX98510	Canola	nucleus	22.5	26.58
CDX93460	Canola	cytosol, plastid	19.29	23.48
CDX94928	Canola	plastid	19.29	23.48
CDX78882	Canola	cytosol	19.29	22.59
CDX99446	Canola	cytosol	19.29	22.59
CDY22613	Canola	cytosol, plastid	17.86	21.55

Protein Annotations

MapMan:15.5.4.5	GO:A0A078IQN8	UniProt:A0A078IQN8	EnsemblPlants:CDY52216	ProteinID:CDY52216	ProteinID:CDY52216.1
ncoils:Coil	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0006139
GO:GO:0006351	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565
EnsemblPlantsGene:GSBRNA2T00005172001	InterPro:IPR025422	PFAM:PF14144	PFscan:PS51806	PANTHER:PTHR22952	PANTHER:PTHR22952:SF210
InterPro:TGA_domain	UniParc:UPI0004EDF89F	SEG:seg	:	:	:

Description

BnaAnng11390DBnaAnng11390D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IQN8]

Coordinates

chrLK033067:+:71141..72786

Molecular Weight (calculated)

31035.6 Da

IEP (calculated)

4.977

GRAVY (calculated)

-0.499

Length

280 amino acids

Sequence
(BLAST)

001: MENKGKNIEQ AQASCYQQWM SLQSQRVPEL KQALAQRRTH EGTADAAADD NKLRELTQNI IGDFKNYAGK RADLSHRCSS SYYAPSWNTP LENALIWMGG
101: CRPSSFFRLV YALCGSQTEI RVTQFLRNID GYDYSGSGGA SLSDLTAEQL AKINVLHVKI IDEEEKMTKK VSSLQEDAAD IPISTVAYAE EHVGEPNAMV
201: DQALDKQEEA MATLLAEADN LRVDTLAKII EILTPVQAGD FLMAGKKLHL SMHHWGALRD RRRGECIIDA GNDGGGEEEK

Best Arabidopsis Sequence Match ( AT5G45830.2 )
(BLAST)

001: MGSSSKNIEQ AQDSYLEWMS LQSQRIPELK QLLAQRRSHG DEDNDNKLRK LTGKIIGDFK NYAAKRADLA HRCSSNYYAP TWNSPLENAL IWMGGCRPSS
101: FFRLVYALCG SQTEIRVTQF LRNIDGYESS GGGGGASLSD LSAEQLAKIN VLHVKIIDEE EKMTKKVSSL QEDAADIPIA TVAYEMENVG EPNVVVDQAL
201: DKQEEAMARL LVEADNLRVD TLAKILGILS PVQGADFLLA GKKLHLSMHE WGTMRDRRRR DCMVDTEGNA GGEEGK

Arabidopsis Description

DOG1delay of germination 1 [Source:TAIR;Acc:AT5G45830]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.