Factsheet for PGSC0003DMT400088909

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400068759	Potato	cytosol	89.34	93.16
Solyc03g006120.2.1	Tomato	cytosol, mitochondrion	73.77	90.45
PGSC0003DMT400073296	Potato	nucleus	52.05	50.6
PGSC0003DMT400073292	Potato	cytosol	47.95	46.8
AT4G18680.1	Thale cress	cytosol	35.66	37.02
PGSC0003DMT400073133	Potato	nucleus	42.21	36.79
Bra012582.1-P	Field mustard	cytosol	36.07	35.48
CDY70293	Canola	cytosol	36.07	35.48
VIT_19s0014g01220.t01	Wine grape	nucleus	34.02	33.74
CDX78883	Canola	cytosol, nucleus, plastid	17.21	33.6
CDX76507	Canola	nucleus	31.97	32.64
Bra013338.1-P	Field mustard	cytosol	33.61	32.54
CDY66844	Canola	cytosol	37.7	32.28
AT4G18690.1	Thale cress	cytosol	37.3	32.27
Bra020997.1-P	Field mustard	nucleus	37.7	32.06
CDY23102	Canola	nucleus	36.07	31.43
CDX99444	Canola	cytosol, nucleus, plastid	16.8	31.3
CDY52216	Canola	cytosol	35.66	31.07
Bra017589.1-P	Field mustard	cytosol	35.66	31.07
Bra025050.1-P	Field mustard	nucleus	35.25	30.71
CDY58051	Canola	nucleus	34.84	30.36
PGSC0003DMT400059950	Potato	cytosol	34.84	29.93
CDY61468	Canola	cytosol	34.02	29.64
Zm00001d043390_P001	Maize	cytosol	36.07	29.63
GSMUA_Achr4P08070_001	Banana	cytosol	27.46	29.52
AT5G45830.1	Thale cress	nucleus	38.11	28.79
TraesCS3D01G295800.1	Wheat	cytosol	34.43	28.77
TraesCS3A01G306200.1	Wheat	cytosol	34.84	28.72
TraesCS3B01G330400.1	Wheat	cytosol	34.43	28.47
CDY34053	Canola	cytosol	37.7	28.22
PGSC0003DMT400011369	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	27.46	27.92
OQU87585	Sorghum	cytosol	34.84	27.6
PGSC0003DMT400018207	Potato	nucleus	19.26	27.17
PGSC0003DMT400026417	Potato	cytosol	23.77	26.13
PGSC0003DMT400039657	Potato	cytosol	23.36	25.45
PGSC0003DMT400028833	Potato	cytosol	24.59	24.19
PGSC0003DMT400028832	Potato	cytosol	9.84	21.62
PGSC0003DMT400012745	Potato	cytosol	20.49	21.19

Protein Annotations

EntrezGene:107059092	MapMan:15.5.4.5	ncoils:Coil	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0006139	GO:GO:0006351	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0043565	InterPro:IPR025422	UniProt:M1DH05	PFAM:PF14144	EnsemblPlantsGene:PGSC0003DMG400038480
PGSC:PGSC0003DMG400038480	EnsemblPlants:PGSC0003DMT400088909	PFscan:PS51806	PANTHER:PTHR22952	PANTHER:PTHR22952:SF210	InterPro:TGA_domain
UniParc:UPI00029537CB	RefSeq:XP_015160993.1	SEG:seg	:	:	:

Description

DOG1 alpha splice variant [Source:PGSC_GENE;Acc:PGSC0003DMG400038480]

Coordinates

chr3:+:1465441..1467453

Molecular Weight (calculated)

28227.0 Da

IEP (calculated)

8.317

GRAVY (calculated)

-0.580

Length

244 amino acids

Sequence
(BLAST)

001: MDEQSTRRTK RASKRHRLRS KKELQNAIVY ARKNELNDDE LNELLRKMVN NFQEYANGRS RLARVDVSPF FAPTWCTPLE NSVLWIGGCR PSSFIRLIYA
101: LSGIEIESHI AEYLQGMKIG DFGQLSGKQI AMIDKLQRQI ILEERKLCSR LASLQEDVVD QPFAMAARIY DAERGENEIE PLNKHGEDMS NLLEEVDELR
201: MKTLKEILGI LTPIQGVEYL AAAKRIRLCL QQWGKKREHE HNSN

Best Arabidopsis Sequence Match ( AT4G18690.1 )
(BLAST)

001: MATSSSSYGI EQLQKGCYYE WMSVQAKHIV DLKEALMSHR SKEDHKLEEL VGKIVNDFQK YTEKRSELSR RSCSSYFAPS WNSPLENGLL WMGGCRPSSF
101: IRVIYSLCGS QAETQLSQYL LKIDENVEVN HGGSMSDLNA SQLAKINDLH IKVIEKEDKI TKKSANLQEN VADMPIAIAA YATDLMNGDV VVEDALDKYE
201: EGMAVLMVEA DKLRFETLRK IVDVVTPVQA AEFLLAGKRL HISLHEWGRV REEQRFGCVR TDAAAATGGA GTEKSKRSSL LM

Arabidopsis Description

DOGL3Protein DOG1-like 3 [Source:UniProtKB/Swiss-Prot;Acc:Q58FV0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.