CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY70293	Canola	cytosol	85.26	97.98
CDX76507	Canola	nucleus	64.56	76.99
AT4G18690.1	Thale cress	cytosol	73.68	74.47
AT4G18680.1	Thale cress	cytosol	56.84	68.94
CDY34053	Canola	cytosol	74.39	65.03
CDY58051	Canola	nucleus	47.37	48.21
CDY61468	Canola	cytosol	47.02	47.86
CDY52216	Canola	cytosol	46.67	47.5
CDY23102	Canola	nucleus	45.61	46.43
CDX78883	Canola	cytosol, nucleus, plastid	20.35	46.4
CDX99444	Canola	cytosol, nucleus, plastid	20.0	43.51
Solyc03g006120.2.1	Tomato	cytosol, mitochondrion	28.42	40.7
VIT_19s0014g01220.t01	Wine grape	nucleus	32.98	38.21
PGSC0003DMT400088909	Potato	nucleus	32.28	37.7
PGSC0003DMT400068759	Potato	cytosol	29.82	36.32
Solyc02g072570.1.1	Tomato	cytosol	31.58	36.0
PGSC0003DMT400073296	Potato	nucleus	31.58	35.86
PGSC0003DMT400073292	Potato	cytosol	30.53	34.8
PGSC0003DMT400073133	Potato	nucleus	31.58	32.14
Solyc02g073570.1.1	Tomato	nucleus	31.23	31.9
Zm00001d043390_P001	Maize	cytosol	30.53	29.29
GSMUA_Achr4P08070_001	Banana	cytosol	22.81	28.63
OQU87585	Sorghum	cytosol	30.18	27.92
TraesCS3A01G306200.1	Wheat	cytosol	27.02	26.01
TraesCS3D01G295800.1	Wheat	cytosol	26.32	25.68
TraesCS3B01G330400.1	Wheat	cytosol	26.32	25.42
CDX97614	Canola	nucleus	21.05	25.32
CDY70896	Canola	nucleus	20.7	24.89
CDX98510	Canola	nucleus	20.7	24.89
CDX93460	Canola	cytosol, plastid	20.0	24.78
CDY22613	Canola	cytosol, plastid	19.65	24.14
CDX94928	Canola	plastid	19.3	23.91
CDX99446	Canola	cytosol	18.6	22.18
CDX78882	Canola	cytosol	18.6	22.18

Protein Annotations

MapMan:15.5.4.5	GO:A0A078JJG2	UniProt:A0A078JJG2	EnsemblPlants:CDY66844	ProteinID:CDY66844	ProteinID:CDY66844.1
ncoils:Coil	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0006139
GO:GO:0006351	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565
EnsemblPlantsGene:GSBRNA2T00056688001	InterPro:IPR025422	PFAM:PF14144	PFscan:PS51806	PANTHER:PTHR22952	PANTHER:PTHR22952:SF210
InterPro:TGA_domain	UniParc:UPI0004EC476B	SEG:seg	:	:	:

Description

BnaC07g50150DBnaC07g50150D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JJG2]

Coordinates

chrLK035515:+:8133..8990

Molecular Weight (calculated)

31617.4 Da

IEP (calculated)

5.411

GRAVY (calculated)

-0.368

Length

285 amino acids

Sequence
(BLAST)

001: MASGSSSICG IGHLQKECYY EWMRTQSKHI VDLKEVLMSQ RSNAYDHHKL EELVGRIVND FQNYADKRSE LADRSCSSYF APSWNSSLEN GLLWMGGCRP
101: SSFMRIIYAL CGSHAETQLS QYLLKMDGEV VDGHDGDSSM SELNATQLAK INDLHVEVID KEDKLSKLSA NMQEDVADMP IAVTAFSRDS VEADVAVEDA
201: LDKHEEGMAV LIADADKLRL ETLKKIVEVL TPVQAAEFLL SGKRLHVSLH EWGRVREERR FGCARAEDAA AARGGAGKSK RSATC

Best Arabidopsis Sequence Match ( AT4G18690.1 )
(BLAST)

001: MATSSSSYGI EQLQKGCYYE WMSVQAKHIV DLKEALMSHR SKEDHKLEEL VGKIVNDFQK YTEKRSELSR RSCSSYFAPS WNSPLENGLL WMGGCRPSSF
101: IRVIYSLCGS QAETQLSQYL LKIDENVEVN HGGSMSDLNA SQLAKINDLH IKVIEKEDKI TKKSANLQEN VADMPIAIAA YATDLMNGDV VVEDALDKYE
201: EGMAVLMVEA DKLRFETLRK IVDVVTPVQA AEFLLAGKRL HISLHEWGRV REEQRFGCVR TDAAAATGGA GTEKSKRSSL LM

Arabidopsis Description

DOGL3Protein DOG1-like 3 [Source:UniProtKB/Swiss-Prot;Acc:Q58FV0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.