Factsheet for Os03t0812400-01

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plastid

Predictor Summary:

plastid 3
cytosol 2
extracellular 3
endoplasmic reticulum 4
vacuole 3
plasma membrane 4
golgi 3
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plastid
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	plastid
EpiLoc:	cytosol
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	nucleus, plasma membrane
Predotar:	plastid
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0267900-01
Os01t0279300-01
Os01t0810300-01
Os03t0319300-01
Os03t0743500-02
Os05t0491000-01
Os05t0491100-01
Os07t0687200-02
Os12t0603800-00

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G39670.1	Os01t0267900-01	AT2G41090.1	17360592
AT5G39670.1	Os01t0279300-01	AT2G41090.1	17360592
AT5G39670.1	Os01t0810300-01	AT2G41090.1	17360592
AT5G39670.1	Os03t0319300-01	AT2G41090.1	17360592
AT5G39670.1	Os05t0491000-01	AT2G41090.1	17360592
AT5G39670.1	Os05t0491100-01	AT2G41090.1	17360592
AT5G39670.1	Os07t0687200-02	AT2G41090.1	17360592
AT5G39670.1	Os12t0603800-00	AT2G41090.1	17360592
AT5G39670.1	Os01t0267900-01	AT2G41100.1	17360592
AT5G39670.1	Os01t0279300-01	AT2G41100.1	17360592
AT5G39670.1	Os01t0810300-01	AT2G41100.1	17360592
AT5G39670.1	Os03t0319300-01	AT2G41100.1	17360592
AT5G39670.1	Os05t0491000-01	AT2G41100.1	17360592
AT5G39670.1	Os05t0491100-01	AT2G41100.1	17360592
AT5G39670.1	Os07t0687200-02	AT2G41100.1	17360592
AT5G39670.1	Os12t0603800-00	AT2G41100.1	17360592
AT5G39670.1	Os03t0743500-02	AT4G14640.1	17360592
AT5G39670.1	Os01t0267900-01	AT5G21274.1	17360592
AT5G39670.1	Os01t0279300-01	AT5G21274.1	17360592
AT5G39670.1	Os01t0810300-01	AT5G21274.1	17360592
AT5G39670.1	Os03t0319300-01	AT5G21274.1	17360592
AT5G39670.1	Os05t0491000-01	AT5G21274.1	17360592
AT5G39670.1	Os05t0491100-01	AT5G21274.1	17360592
AT5G39670.1	Os07t0687200-02	AT5G21274.1	17360592
AT5G39670.1	Os12t0603800-00	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os03t0812800-00	Rice	extracellular	52.11	51.63
Zm00001d013004_P001	Maize	vacuole	45.07	43.84
TraesCS5D01G481000.1	Wheat	extracellular, plastid	40.38	43.22
HORVU5Hr1G111520.1	Barley	plastid	41.31	42.72
TraesCS5B01G480300.1	Wheat	endoplasmic reticulum, plastid	40.38	42.36
TraesCS5A01G467800.1	Wheat	endoplasmic reticulum, plastid	38.5	41.21
OQU90756	Sorghum	endoplasmic reticulum, vacuole	42.25	39.65
Bra030632.1-P	Field mustard	cytosol	15.02	39.02
Bra000299.1-P	Field mustard	cytosol	13.15	38.89
GSMUA_Achr7P21710_001	Banana	cytosol	24.41	38.81
CDY06192	Canola	cytosol	12.68	37.5
CDY09997	Canola	cytosol	12.68	37.5
Bra032444.1-P	Field mustard	cytosol	12.68	37.5
CDY35936	Canola	cytosol	13.62	34.52
CDY28045	Canola	cytosol	13.62	34.52
PGSC0003DMT400086481	Potato	cytosol	13.15	31.46
GSMUA_AchrUn_...	Banana	cytosol	23.94	30.91
CDY09996	Canola	cytosol	12.21	28.57
Os12t0140050-00	Rice	cytosol	18.78	26.49
Solyc12g009630.1.1	Tomato	endoplasmic reticulum, extracellular, golgi	18.78	25.64
KRH40081	Soybean	cytosol	24.88	25.6
KRH01190	Soybean	cytosol, nucleus, vacuole	24.41	25.12
VIT_14s0108g01000.t01	Wine grape	cytosol	17.84	24.36
AT3G29000.1	Thale cress	endoplasmic reticulum	22.07	24.23
KRH16684	Soybean	cytosol	20.66	22.8
AT5G39670.1	Thale cress	plastid	21.6	22.55
Os11t0600500-00	Rice	endoplasmic reticulum	19.25	21.47
Os09t0412300-01	Rice	plastid	7.04	15.46

Protein Annotations

Gene3D:1.10.238.10	MapMan:35.2	EntrezGene:4334549	ProteinID:AAP73844.1	ProteinID:AAR89862.1	ProteinID:ABF99508.1
EMBL:AK119951	ProteinID:BAF13593.1	ProteinID:BAS87016.1	ProteinID:EAZ29030.1	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS
InterPro:EF_hand_dom	GO:GO:0003674	GO:GO:0005488	GO:GO:0005509	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:IPR002048	EnsemblPlantsGene:Os03g0812400	EnsemblPlants:Os03t0812400-01	PFAM:PF13499	ScanProsite:PS00018
PFscan:PS50222	PANTHER:PTHR45512	UniProt:Q7XZH3	SMART:SM00054	SUPFAM:SSF47473	UniParc:UPI00001AA3E4
RefSeq:XP_015629997.1	SEG:seg	:	:	:	:

Description

EF-Hand type domain containing protein. (Os03t0812400-01)

Coordinates

chr3:+:34036246..34037092

Molecular Weight (calculated)

22708.9 Da

IEP (calculated)

4.104

GRAVY (calculated)

0.181

Length

213 amino acids

Sequence
(BLAST)

001: MSQFVATFEY CSLAVSVSSL LIRFVLHPLV RDAIILVMSR AGASSLSCAL LGLLAHDDSA LFAADDRCAG AVAVVEPPPP LRRECELCAR RGGAGLSRHD
101: VAAVVASLGM VAAGEDDDDD DEACGVCEAV AAVEEMAEGK VAGEGELREA FYVFDRDEDG YVSAAELWNV MRRLGIEEGA RYGDCVRMIA AYDGDGDGRI
201: SFQEFRAMME NAV

Best Arabidopsis Sequence Match ( AT5G39670.1 )
(BLAST)

001: MTENQLYSFI TMKSSLSKCK QSSSLSFPLF GLINFFLIGF FRWVSFAQLF FSRFWPLVQH QQCVSEKKSK DLEFQTSIKH EEYRDDDDDG LCREDVGMVM
101: KSLGLSTDQE NEGLQKQYSS KEVSNLFEEK EPSLEEVKQA FDVFDENRDG FIDPIDLQRV LTILGLKQGS NLENCRRMIR SFDGSKDGRI DFYGFVKFME
201: NNFC

Arabidopsis Description

CML46Probable calcium-binding protein CML45 [Source:UniProtKB/Swiss-Prot;Acc:Q93Z27]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.