Factsheet for Bra000299.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
extracellular 1
cytosol 2
plasma membrane 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra032444.1-P	Field mustard	cytosol	83.33	83.33
Bra030632.1-P	Field mustard	cytosol	81.94	71.95
CDY28045	Canola	cytosol	73.61	63.1
CDY35936	Canola	cytosol	73.61	63.1
PGSC0003DMT400086481	Potato	cytosol	50.0	40.45
Bra039037.1-P	Field mustard	cytosol	40.28	27.62
Solyc12g009630.1.1	Tomato	endoplasmic reticulum, extracellular, golgi	55.56	25.64
GSMUA_Achr7P21710_001	Banana	cytosol	44.44	23.88
GSMUA_Achr9P17010_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	45.83	21.15
Os12t0140050-00	Rice	cytosol	41.67	19.87
TraesCS1B01G470900.1	Wheat	endoplasmic reticulum, golgi	45.83	17.74
TraesCS1A01G435100.1	Wheat	extracellular	43.06	17.71
GSMUA_AchrUn_...	Banana	cytosol	40.28	17.58
TraesCS1A01G435200.1	Wheat	endoplasmic reticulum, extracellular	44.44	17.2
OQU88717	Sorghum	cytosol	43.06	16.85
HORVU1Hr1G094160.1	Barley	extracellular	43.06	16.67
TraesCS1B01G471000.1	Wheat	endoplasmic reticulum, golgi	43.06	16.67
TraesCS1D01G444200.1	Wheat	endoplasmic reticulum, golgi	44.44	16.58
TraesCS5D01G238700.1	Wheat	plastid	38.89	16.09
EER98893	Sorghum	plastid	41.67	15.87
TraesCS5A01G229000.1	Wheat	plastid	38.89	15.73
HORVU1Hr1G094230.1	Barley	extracellular, golgi	40.28	15.59
Zm00001d005766_P001	Maize	plastid	38.89	15.56
Bra025654.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	40.28	15.43
HORVU5Hr1G066260.1	Barley	plastid	38.89	15.38
Bra030349.1-P	Field mustard	endoplasmic reticulum, plastid	37.5	14.59
Bra028438.1-P	Field mustard	plastid	38.89	14.29
Bra033077.1-P	Field mustard	cytosol, endoplasmic reticulum, mitochondrion, plastid	36.11	13.98
Zm00001d013004_P001	Maize	vacuole	40.28	13.24
Os03t0812400-01	Rice	endoplasmic reticulum, plastid	38.89	13.15
OQU90756	Sorghum	endoplasmic reticulum, vacuole	38.89	12.33
HORVU5Hr1G111520.1	Barley	plastid	34.72	12.14
Os03t0812800-00	Rice	extracellular	36.11	12.09
TraesCS5B01G227700.1	Wheat	plastid	37.5	11.84
TraesCS5A01G467800.1	Wheat	endoplasmic reticulum, plastid	31.94	11.56
TraesCS5D01G481000.1	Wheat	extracellular, plastid	31.94	11.56
TraesCS5B01G480300.1	Wheat	endoplasmic reticulum, plastid	31.94	11.33

Protein Annotations

EnsemblPlants:Bra000299.1	EnsemblPlants:Bra000299.1-P	EnsemblPlantsGene:Bra000299	Gene3D:1.10.238.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005509	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	InterPro:IPR002048	PANTHER:PTHR10891
PANTHER:PTHR10891:SF662	PFAM:PF13499	PFscan:PS50222	PRINTS:PR01697	ScanProsite:PS00018	SMART:SM00054
SUPFAM:SSF47473	UniParc:UPI000253FCE4	UniProt:M4C7X1	MapMan:35.1	:	:

Description

AT2G43290 (E=4e-033) MSS3 | MSS3 (multicopy suppressors of snf4 deficiency in yeast 3); calcium ion binding

Coordinates

chrA03:-:10414161..10414379

Molecular Weight (calculated)

8033.7 Da

IEP (calculated)

4.709

GRAVY (calculated)

-0.436

Length

72 amino acids

Sequence
(BLAST)

1: MKEAFNVFDQ DGDGFITVEE LKSVMSSLGL KQGKTLEGCK KMIMQVDVDG DGRVNYKEFL QMMKGDGFSR SS

Best Arabidopsis Sequence Match ( AT2G43290.1 )
(BLAST)

001: MVRIFLLYNI LNSFLLSLVP KKLRTLFPLS WFDKTLHKNS PPSPSTMLPS PSSSSAPTKR IDPSELKRVF QMFDKNGDGR ITKEELNDSL ENLGIYIPDK
101: DLTQMIHKID ANGDGCVDID EFESLYSSIV DEHHNDGETE EEDMKDAFNV FDQDGDGFIT VEELKSVMAS LGLKQGKTLD GCKKMIMQVD ADGDGRVNYK
201: EFLQMMKGGG FSSSN

Arabidopsis Description

CML5MSS3 [Source:UniProtKB/TrEMBL;Acc:A0A178VP84]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.