Factsheet for HORVU1Hr1G094230.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi, extracellular

Predictor Summary:

nucleus 1
cytosol 1
extracellular 5
endoplasmic reticulum 4
vacuole 4
plasma membrane 5
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, golgi
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	cytosol
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU0Hr1G001280.1
HORVU2Hr1G016740.4
HORVU3Hr1G038010.1
HORVU3Hr1G079210.4
HORVU4Hr1G026290.3
HORVU5Hr1G014060.1
HORVU5Hr1G014070.2
HORVU5Hr1G044710.4

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G39670.1	HORVU0Hr1G001280.1	AT2G41090.1	17360592
AT5G39670.1	HORVU2Hr1G016740.4	AT2G41090.1	17360592
AT5G39670.1	HORVU3Hr1G038010.1	AT2G41090.1	17360592
AT5G39670.1	HORVU3Hr1G079210.4	AT2G41090.1	17360592
AT5G39670.1	HORVU4Hr1G026290.3	AT2G41090.1	17360592
AT5G39670.1	HORVU5Hr1G014060.1	AT2G41090.1	17360592
AT5G39670.1	HORVU5Hr1G014070.2	AT2G41090.1	17360592
AT5G39670.1	HORVU5Hr1G044710.4	AT2G41090.1	17360592
AT5G39670.1	HORVU0Hr1G001280.1	AT2G41100.1	17360592
AT5G39670.1	HORVU2Hr1G016740.4	AT2G41100.1	17360592
AT5G39670.1	HORVU3Hr1G038010.1	AT2G41100.1	17360592
AT5G39670.1	HORVU3Hr1G079210.4	AT2G41100.1	17360592
AT5G39670.1	HORVU4Hr1G026290.3	AT2G41100.1	17360592
AT5G39670.1	HORVU5Hr1G014060.1	AT2G41100.1	17360592
AT5G39670.1	HORVU5Hr1G014070.2	AT2G41100.1	17360592
AT5G39670.1	HORVU5Hr1G044710.4	AT2G41100.1	17360592
AT5G39670.1	HORVU0Hr1G001280.1	AT5G21274.1	17360592
AT5G39670.1	HORVU2Hr1G016740.4	AT5G21274.1	17360592
AT5G39670.1	HORVU3Hr1G038010.1	AT5G21274.1	17360592
AT5G39670.1	HORVU3Hr1G079210.4	AT5G21274.1	17360592
AT5G39670.1	HORVU4Hr1G026290.3	AT5G21274.1	17360592
AT5G39670.1	HORVU5Hr1G014060.1	AT5G21274.1	17360592
AT5G39670.1	HORVU5Hr1G014070.2	AT5G21274.1	17360592
AT5G39670.1	HORVU5Hr1G044710.4	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G435200.1	Wheat	endoplasmic reticulum, extracellular	81.72	81.72
TraesCS1D01G444200.1	Wheat	endoplasmic reticulum, golgi	83.87	80.83
HORVU1Hr1G094160.1	Barley	extracellular	80.65	80.65
OQU88717	Sorghum	cytosol	45.7	46.2
CDY28045	Canola	cytosol	18.28	40.48
Bra032444.1-P	Field mustard	cytosol	15.59	40.28
CDY06192	Canola	cytosol	15.59	40.28
CDY09997	Canola	cytosol	15.59	40.28
Bra000299.1-P	Field mustard	cytosol	15.59	40.28
CDY35936	Canola	cytosol	17.74	39.29
Bra030632.1-P	Field mustard	cytosol	17.2	39.02
GSMUA_Achr7P21710_001	Banana	cytosol	26.88	37.31
PGSC0003DMT400086481	Potato	cytosol	17.2	35.96
HORVU5Hr1G111520.1	Barley	plastid	34.95	31.55
CDY09996	Canola	cytosol	15.05	30.77
GSMUA_AchrUn_...	Banana	cytosol	25.81	29.09
VIT_14s0108g01000.t01	Wine grape	cytosol	24.19	28.85
Solyc12g009630.1.1	Tomato	endoplasmic reticulum, extracellular, golgi	22.58	26.92
HORVU5Hr1G066260.1	Barley	plastid	25.27	25.82
AT3G29000.1	Thale cress	endoplasmic reticulum	25.27	24.23
KRH40081	Soybean	cytosol	26.88	24.15
KRH01190	Soybean	cytosol, nucleus, vacuole	25.81	23.19
KRH16684	Soybean	cytosol	22.58	21.76
AT5G39670.1	Thale cress	plastid	22.58	20.59
HORVU1Hr1G086900.1	Barley	endoplasmic reticulum, vacuole	18.82	17.77

Protein Annotations

EnsemblPlants:HORVU1Hr1G094230.1	EnsemblPlantsGene:HORVU1Hr1G094230	Gene3D:1.10.238.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005509
InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	InterPro:IPR002048	PANTHER:PTHR45512	PFAM:PF00036
PFAM:PF13202	PFscan:PS50222	ScanProsite:PS00018	SMART:SM00054	SUPFAM:SSF47473	TMHMM:TMhelix
UniParc:UPI000294E0D6	UniProt:M0V190	MapMan:35.2	:	:	:

Description

No Description!

Coordinates

chrchr1H:+:554817193..554818260

Molecular Weight (calculated)

20769.3 Da

IEP (calculated)

4.095

GRAVY (calculated)

0.331

Length

186 amino acids

Sequence
(BLAST)

001: MWAVVIMGQN ILIALVSSLL TLILGPLIID VILVSKKIWS FLHTFTKYLV HDDTLVIDSV VLDDSPMLPA QLVGGGGLTS VDIEIVTTRL GLGGWSYQGC
101: EGIGVVDELI DGKQASEDEL EATFYIFDRN EDGFICAGEL WNVMRRLGWK EGAMYEDCVR MIRAFDEDGD GKINFLEFRR MMENVV

Best Arabidopsis Sequence Match ( AT5G39670.1 )
(BLAST)

001: MTENQLYSFI TMKSSLSKCK QSSSLSFPLF GLINFFLIGF FRWVSFAQLF FSRFWPLVQH QQCVSEKKSK DLEFQTSIKH EEYRDDDDDG LCREDVGMVM
101: KSLGLSTDQE NEGLQKQYSS KEVSNLFEEK EPSLEEVKQA FDVFDENRDG FIDPIDLQRV LTILGLKQGS NLENCRRMIR SFDGSKDGRI DFYGFVKFME
201: NNFC

Arabidopsis Description

CML46Probable calcium-binding protein CML45 [Source:UniProtKB/Swiss-Prot;Acc:Q93Z27]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.