Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, vacuole
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 1
- vacuole 1
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1B01G422600.1 | Wheat | plastid | 74.11 | 78.92 |
| TraesCS1D01G402400.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 74.11 | 78.92 |
| TraesCS1A01G394100.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, plastid | 73.6 | 78.38 |
| Os11t0600500-00 | Rice | endoplasmic reticulum | 48.22 | 49.74 |
| Zm00001d048913_P001 | Maize | plastid | 39.59 | 38.81 |
| EES10045 | Sorghum | endoplasmic reticulum, plasma membrane | 34.52 | 34.69 |
| KRH70747 | Soybean | cytosol | 22.84 | 30.0 |
| KRH50574 | Soybean | plastid | 23.86 | 28.66 |
| GSMUA_Achr2P14950_001 | Banana | endoplasmic reticulum | 25.38 | 27.32 |
| VIT_01s0026g02590.t01 | Wine grape | endoplasmic reticulum | 23.35 | 25.56 |
| KRH74886 | Soybean | extracellular, golgi | 23.86 | 25.13 |
| KRG89588 | Soybean | endoplasmic reticulum, golgi | 23.86 | 24.61 |
| HORVU5Hr1G066260.1 | Barley | plastid | 21.83 | 23.63 |
| HORVU1Hr1G094230.1 | Barley | extracellular, golgi | 17.77 | 18.82 |
| HORVU1Hr1G094160.1 | Barley | extracellular | 17.26 | 18.28 |
| HORVU5Hr1G111520.1 | Barley | plastid | 15.74 | 15.05 |
Protein Annotations
| Gene3D:1.10.238.10 | MapMan:35.1 | UniProt:A0A287GLD9 | InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005509 | EnsemblPlantsGene:HORVU1Hr1G086900 | EnsemblPlants:HORVU1Hr1G086900.1 | InterPro:IPR002048 |
| PFAM:PF13499 | ScanProsite:PS00018 | PFscan:PS50222 | PANTHER:PTHR45512 | SMART:SM00054 | SUPFAM:SSF47473 |
| UniParc:UPI000B469550 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chrchr1H:-:538390618..538391311
Molecular Weight (calculated)
22225.4 Da
IEP (calculated)
4.253
GRAVY (calculated)
-0.280
Length
197 amino acids
Sequence
(BLAST)
(BLAST)
001: FPSPKQPDLK PIAQTMDKSP ATAGCHLEPL FLEPLGILIL FILTWFISEV QRLLPSSCQS CSCPVSTTTS PPVLAETSKA PNKSEYVEMN AKQSDAEIAM
101: RKMGFDFDQE KSCEHISTLF DDDEPSFQEV KMAFLVFDEN NDGYIDALDL RRVLHNLGLG DRVGVSESEQ MIARYDMNND RRIDLMEFTK VLEDSFC
101: RKMGFDFDQE KSCEHISTLF DDDEPSFQEV KMAFLVFDEN NDGYIDALDL RRVLHNLGLG DRVGVSESEQ MIARYDMNND RRIDLMEFTK VLEDSFC
001: MTENQLYSFI TMKSSLSKCK QSSSLSFPLF GLINFFLIGF FRWVSFAQLF FSRFWPLVQH QQCVSEKKSK DLEFQTSIKH EEYRDDDDDG LCREDVGMVM
101: KSLGLSTDQE NEGLQKQYSS KEVSNLFEEK EPSLEEVKQA FDVFDENRDG FIDPIDLQRV LTILGLKQGS NLENCRRMIR SFDGSKDGRI DFYGFVKFME
201: NNFC
101: KSLGLSTDQE NEGLQKQYSS KEVSNLFEEK EPSLEEVKQA FDVFDENRDG FIDPIDLQRV LTILGLKQGS NLENCRRMIR SFDGSKDGRI DFYGFVKFME
201: NNFC
Arabidopsis Description
CML46Probable calcium-binding protein CML45 [Source:UniProtKB/Swiss-Prot;Acc:Q93Z27]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.