Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- nucleus 1
- endoplasmic reticulum 5
- extracellular 3
- golgi 3
- plasma membrane 4
- vacuole 3
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1A01G394100.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, plastid | 47.64 | 49.19 |
| TraesCS1B01G422600.1 | Wheat | plastid | 47.12 | 48.65 |
| TraesCS1D01G402400.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 47.12 | 48.65 |
| HORVU1Hr1G086900.1 | Barley | endoplasmic reticulum, vacuole | 49.74 | 48.22 |
| Zm00001d048913_P001 | Maize | plastid | 43.98 | 41.79 |
| EES10045 | Sorghum | endoplasmic reticulum, plasma membrane | 40.31 | 39.29 |
| KRH70747 | Soybean | cytosol | 28.27 | 36.0 |
| GSMUA_Achr2P14950_001 | Banana | endoplasmic reticulum | 29.32 | 30.6 |
| KRH50574 | Soybean | plastid | 25.65 | 29.88 |
| KRH74886 | Soybean | extracellular, golgi | 27.23 | 27.81 |
| KRG89588 | Soybean | endoplasmic reticulum, golgi | 25.13 | 25.13 |
| VIT_01s0026g02590.t01 | Wine grape | endoplasmic reticulum | 23.04 | 24.44 |
| Os12t0140050-00 | Rice | cytosol | 15.71 | 19.87 |
| Os03t0812400-01 | Rice | endoplasmic reticulum, plastid | 21.47 | 19.25 |
| Os03t0812800-00 | Rice | extracellular | 18.32 | 16.28 |
| Os09t0412300-01 | Rice | plastid | 5.76 | 11.34 |
Protein Annotations
| Gene3D:1.10.238.10 | MapMan:35.1 | EntrezGene:4350858 | ProteinID:ABA94581.1 | ProteinID:BAF28586.1 | ProteinID:BAT14749.1 |
| ProteinID:EAZ18894.1 | InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005509 | InterPro:IPR002048 | EnsemblPlantsGene:Os11g0600500 | EnsemblPlants:Os11t0600500-00 | PFAM:PF13499 | ScanProsite:PS00018 |
| PFscan:PS50222 | PANTHER:PTHR45512 | UniProt:Q2R1L7 | SMART:SM00054 | SUPFAM:SSF47473 | UniParc:UPI0000681F06 |
| RefSeq:XP_015616554.1 | : | : | : | : | : |
Description
Calcium-binding EF-hand domain containing protein. (Os11t0600500-00)
Coordinates
chr11:-:23060525..23061100
Molecular Weight (calculated)
22043.5 Da
IEP (calculated)
4.362
GRAVY (calculated)
-0.232
Length
191 amino acids
Sequence
(BLAST)
(BLAST)
001: MEKSPAMHFL LELESQEPVC LLILFTMFTW FISKVQMILP SSCQHCNYAV TKVTSTPVLA DRKISKNLSK HKDDGIEMTH EDVESVMTKM GPDFDHGKTM
101: VYKEIGSNCM SELFDDDEPS LDEVKQAFLV FDEDNDGYID ALDLYRVLRN LGLREGVGVD ECEQMIAKYD MNRDRRIDMV EFIRVLEASF F
101: VYKEIGSNCM SELFDDDEPS LDEVKQAFLV FDEDNDGYID ALDLYRVLRN LGLREGVGVD ECEQMIAKYD MNRDRRIDMV EFIRVLEASF F
001: MTENQLYSFI TMKSSLSKCK QSSSLSFPLF GLINFFLIGF FRWVSFAQLF FSRFWPLVQH QQCVSEKKSK DLEFQTSIKH EEYRDDDDDG LCREDVGMVM
101: KSLGLSTDQE NEGLQKQYSS KEVSNLFEEK EPSLEEVKQA FDVFDENRDG FIDPIDLQRV LTILGLKQGS NLENCRRMIR SFDGSKDGRI DFYGFVKFME
201: NNFC
101: KSLGLSTDQE NEGLQKQYSS KEVSNLFEEK EPSLEEVKQA FDVFDENRDG FIDPIDLQRV LTILGLKQGS NLENCRRMIR SFDGSKDGRI DFYGFVKFME
201: NNFC
Arabidopsis Description
CML46Probable calcium-binding protein CML45 [Source:UniProtKB/Swiss-Prot;Acc:Q93Z27]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.