Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, plastid, extracellular, cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- endoplasmic reticulum 2
- extracellular 2
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1B01G422600.1 | Wheat | plastid | 92.43 | 92.43 |
| TraesCS1D01G402400.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 91.35 | 91.35 |
| HORVU1Hr1G086900.1 | Barley | endoplasmic reticulum, vacuole | 78.38 | 73.6 |
| Os11t0600500-00 | Rice | endoplasmic reticulum | 49.19 | 47.64 |
| Zm00001d048913_P001 | Maize | plastid | 43.24 | 39.8 |
| EES10045 | Sorghum | endoplasmic reticulum, plasma membrane | 36.22 | 34.18 |
| KRH50574 | Soybean | plastid | 25.95 | 29.27 |
| KRH70747 | Soybean | cytosol | 23.24 | 28.67 |
| GSMUA_Achr2P14950_001 | Banana | endoplasmic reticulum | 26.49 | 26.78 |
| VIT_01s0026g02590.t01 | Wine grape | endoplasmic reticulum | 24.86 | 25.56 |
| KRG89588 | Soybean | endoplasmic reticulum, golgi | 25.41 | 24.61 |
| TraesCS5A01G229000.1 | Wheat | plastid | 22.7 | 23.6 |
| KRH74886 | Soybean | extracellular, golgi | 23.78 | 23.53 |
| TraesCS1A01G435200.1 | Wheat | endoplasmic reticulum, extracellular | 18.92 | 18.82 |
| TraesCS1A01G435100.1 | Wheat | extracellular | 17.3 | 18.29 |
| TraesCS5A01G467800.1 | Wheat | endoplasmic reticulum, plastid | 17.3 | 16.08 |
Protein Annotations
| EnsemblPlants:TraesCS1A01G394100.1 | EnsemblPlantsGene:TraesCS1A01G394100 | Gene3D:1.10.238.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005509 |
| InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom | InterPro:IPR002048 | PANTHER:PTHR45512 | PFAM:PF13499 |
| PFscan:PS50222 | ScanProsite:PS00018 | SEG:seg | SMART:SM00054 | SUPFAM:SSF47473 | TIGR:cd00051 |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr1A:-:560309853..560310779
Molecular Weight (calculated)
20791.6 Da
IEP (calculated)
4.251
GRAVY (calculated)
-0.345
Length
185 amino acids
Sequence
(BLAST)
(BLAST)
001: MEKSPATAGC HHAPLFQEPV GILILFILTW CISKLQSLLP TSCCQSCNCT VSTTTSTPVL AEKKTSKAPN KSEYDEMNAT QSDAEVAMRK MGLDFDQEKS
101: CEYSSTLFDN DEPSFQEVKM AFLVFDENND GYIDALDLRR ILQNLGLGDR VGVNEAEQMI ARYDTNNDRR IDLMEFTKVL EDSFC
101: CEYSSTLFDN DEPSFQEVKM AFLVFDENND GYIDALDLRR ILQNLGLGDR VGVNEAEQMI ARYDTNNDRR IDLMEFTKVL EDSFC
001: MESKSSSSSL PLFALFNFFL ISFCRWVSST RIFLSRFVPL LQHHQRVFDK KNNKDQQETL TKQEDDDDDD DDDDDDDDDD IDISREEAEM VMRSLGLFYN
101: DDQLQEQYSA KEVSSLFEEK EASLEEVKQA FDVFDENKDG FIDAIELQRV LTILGFKQGS YLDNCLVMIR SLDGNKDGKI DFNEFVKFME TSFY
101: DDQLQEQYSA KEVSSLFEEK EASLEEVKQA FDVFDENKDG FIDAIELQRV LTILGFKQGS YLDNCLVMIR SLDGNKDGKI DFNEFVKFME TSFY
Arabidopsis Description
CML45Probable calcium-binding protein CML30 [Source:UniProtKB/Swiss-Prot;Acc:Q9MBG5]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.