Subcellular Localization
min:
: max
Winner_takes_all: golgi, endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- plastid 2
- extracellular 3
- golgi 4
- plasma membrane 3
- endoplasmic reticulum 4
- vacuole 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH50574 | Soybean | plastid | 57.59 | 67.07 |
| KRH70747 | Soybean | cytosol | 33.51 | 42.67 |
| KRH74886 | Soybean | extracellular, golgi | 34.55 | 35.29 |
| VIT_01s0026g02590.t01 | Wine grape | endoplasmic reticulum | 29.32 | 31.11 |
| GSMUA_Achr2P14950_001 | Banana | endoplasmic reticulum | 28.8 | 30.05 |
| KRH40081 | Soybean | cytosol | 31.94 | 29.47 |
| KRH01190 | Soybean | cytosol, nucleus, vacuole | 31.41 | 28.99 |
| KRH16684 | Soybean | cytosol | 26.7 | 26.42 |
| TraesCS1B01G422600.1 | Wheat | plastid | 25.13 | 25.95 |
| TraesCS1D01G402400.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 25.13 | 25.95 |
| TraesCS1A01G394100.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, plastid | 24.61 | 25.41 |
| Os11t0600500-00 | Rice | endoplasmic reticulum | 25.13 | 25.13 |
| HORVU1Hr1G086900.1 | Barley | endoplasmic reticulum, vacuole | 24.61 | 23.86 |
| EES10045 | Sorghum | endoplasmic reticulum, plasma membrane | 24.08 | 23.47 |
| Zm00001d048913_P001 | Maize | plastid | 22.51 | 21.39 |
| Os09t0412300-01 | Rice | plastid | 6.81 | 13.4 |
Protein Annotations
| Gene3D:1.10.238.10 | MapMan:35.1 | UniProt:A0A0R0EI74 | EMBL:ACUP02012229 | InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS |
| InterPro:EF_hand_dom | EnsemblPlantsGene:GLYMA_20G034200 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005509 | InterPro:IPR002048 |
| EnsemblPlants:KRG89588 | ProteinID:KRG89588 | ProteinID:KRG89588.1 | PFAM:PF13499 | ScanProsite:PS00018 | PFscan:PS50222 |
| PANTHER:PTHR45512 | SMART:SM00054 | SUPFAM:SSF47473 | UniParc:UPI00023DD9EF | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr20:-:4731167..4731994
Molecular Weight (calculated)
21860.2 Da
IEP (calculated)
4.406
GRAVY (calculated)
-0.236
Length
191 amino acids
Sequence
(BLAST)
(BLAST)
001: MEQTHGNIII SGLSLCLRIL LSDIKFINGF LSILFFSLQS LGNWVSRNWK SCGTKKPRSY SSPEPQNHNL NLNFIQHGVR LCKEEVIVVM QKLGMSVERD
101: GDGIEDFGEQ EITQMSENEV ISVEEVKEAF NVFDENKDGF IDAGELQRVL RCLGLERDFV QCQKMINGID QNGDELIDHN EFFMLMEQSF C
101: GDGIEDFGEQ EITQMSENEV ISVEEVKEAF NVFDENKDGF IDAGELQRVL RCLGLERDFV QCQKMINGID QNGDELIDHN EFFMLMEQSF C
001: MTENQLYSFI TMKSSLSKCK QSSSLSFPLF GLINFFLIGF FRWVSFAQLF FSRFWPLVQH QQCVSEKKSK DLEFQTSIKH EEYRDDDDDG LCREDVGMVM
101: KSLGLSTDQE NEGLQKQYSS KEVSNLFEEK EPSLEEVKQA FDVFDENRDG FIDPIDLQRV LTILGLKQGS NLENCRRMIR SFDGSKDGRI DFYGFVKFME
201: NNFC
101: KSLGLSTDQE NEGLQKQYSS KEVSNLFEEK EPSLEEVKQA FDVFDENRDG FIDPIDLQRV LTILGLKQGS NLENCRRMIR SFDGSKDGRI DFYGFVKFME
201: NNFC
Arabidopsis Description
CML46Probable calcium-binding protein CML45 [Source:UniProtKB/Swiss-Prot;Acc:Q93Z27]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.